RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ZNF23P17027 643 aa19.6■□□□□ 0.73
CHMP2A-204ENST00000597848 OR3A2P47893 321 aa19.6■□□□□ 0.73
CHMP2A-204ENST00000597848 FHL1Q13642 323 aa19.6■□□□□ 0.73
CHMP2A-204ENST00000597848 IGFN1Q86VF2 1251 aa19.6■□□□□ 0.73
CHMP2A-204ENST00000597848 UBE2J2Q8N2K1 259 aa19.6■□□□□ 0.73
CHMP2A-204ENST00000597848 ICA1LQ8NDH6 482 aa19.6■□□□□ 0.73
CHMP2A-204ENST00000597848 MAGED1Q9Y5V3 778 aaPredicted RBP19.6■□□□□ 0.73
CHMP2A-204ENST00000597848 NCOA6Q14686 2063 aaPredicted RBP19.6■□□□□ 0.73
CHMP2A-204ENST00000597848 ARRDC5A6NEK1 342 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 G3V2T6 193 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 RRP9O43818 475 aaKnown RBP19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 NDUFB2O95178 105 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 BCL10O95999 233 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 IGHV3-9P01782 118 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 GSTM3P21266 225 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 EDNRAP25101 427 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 SELENOPP49908 381 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 ASCL1P50553 236 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 BIDP55957 195 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 CTXN1P60606 82 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 SMARCD3Q6STE5 483 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 TFAP2EQ6VUC0 442 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 HIPK1Q86Z02 1210 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 ZDHHC13Q8IUH4 622 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 ATG16L2Q8NAA4 619 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 FANK1Q8TC84 345 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 LRRC46Q96FV0 321 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 EMC6Q9BV81 110 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 DGCR6LQ9BY27 220 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 ZNF556Q9HAH1 456 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 PRSS50Q9UI38 385 aa19.59■□□□□ 0.73
CHMP2A-204ENST00000597848 SLC35F4A4IF30 521 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 A8MXE2 369 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 MCIDASD6RGH6 385 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 ADAP00813 363 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 ANXA8P13928 327 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 TOP3AQ13472 1001 aaPredicted RBP19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 MELKQ14680 651 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 CARD17Q5XLA6 110 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 ZNF474Q6S9Z5 364 aaPredicted RBP19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 NHLRC1Q6VVB1 395 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 SVOPLQ8N434 492 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 LRRC75AQ8NAA5 344 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 NIPSNAP1Q9BPW8 284 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 RBM24Q9BX46 236 aaKnown RBP19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 JKAMPQ9P055 326 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 KIF17Q9P2E2 1029 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 UPB1Q9UBR1 384 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 IL20RAQ9UHF4 553 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 RCE1Q9Y256 329 aa19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 INTS1Q8N201 2190 aaKnown RBP19.58■□□□□ 0.72
CHMP2A-204ENST00000597848 SAC3D1A6NKF1 404 aa19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 SLC43A1O75387 559 aa19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 KRT33AO76009 404 aa19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 ZNF26P17031 533 aaPredicted RBP19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 DAP3P51398 398 aaKnown RBP19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 ERVK-25P63136 954 aa19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 ELF3P78545 371 aaPredicted RBP19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 ACKR1Q16570 336 aa19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 RFX4Q33E94 735 aa19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 BEND4Q6ZU67 534 aa19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 OR2M2Q96R28 347 aa19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 KATNB1Q9BVA0 655 aa19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 POLDIP3Q9BY77 421 aaKnown RBP19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 ENKD1Q9H0I2 346 aa19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 OR52D1Q9H346 318 aa19.57■□□□□ 0.72
CHMP2A-204ENST00000597848 ZNF432O94892 652 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 COX10Q12887 443 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 CAMK2DQ13557 499 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 TSPO2Q5TGU0 170 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 FBXW9Q5XUX1 488 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 THSD4Q6ZMP0 1018 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 ZNF620Q6ZNG0 422 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 RASSF6Q6ZTQ3 369 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 PQLC1Q8N2U9 271 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 OR6X1Q8NH79 312 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 SAMD8Q96LT4 415 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 ADAD1Q96M93 576 aaKnown RBP19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 SLCO5A1Q9H2Y9 848 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 TXNIPQ9H3M7 391 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 EGLN3Q9H6Z9 239 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 ZNF346Q9UL40 294 aaKnown RBP19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 OAZ3Q9UMX2 235 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 CDH10Q9Y6N8 788 aa19.56■□□□□ 0.72
CHMP2A-204ENST00000597848 OR6C65A6NJZ3 312 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 H0YHG0 523 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 CD14P08571 375 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 SLC6A6P31641 620 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 FXYD6P3P58550 94 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 RPL27P61353 136 aaKnown RBP19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 ANKRD34AQ69YU3 496 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 RPL13AP3Q6NVV1 102 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 CD300LDQ6UXZ3 194 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 DPY19L2P2Q6ZN68 376 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 HDDC2Q7Z4H3 204 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 KIF18BQ86Y91 864 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 GPR137CQ8N3F9 429 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 POMGNT2Q8NAT1 580 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 OR52L1Q8NGH7 329 aa19.55■□□□□ 0.72
CHMP2A-204ENST00000597848 OR6N1Q8NGY5 312 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms