RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 TUBA1BP68363 451 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 TUBA4AP68366 448 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 LIPEQ05469 1076 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 MST1LQ2TV78 715 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 TMEM249Q2WGJ8 235 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 ELOA3BQ3SY89 546 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 C6orf52Q5T4I8 152 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 C1QTNF12Q5T7M4 302 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 TUBA1AQ71U36 451 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 MICU2Q8IYU8 434 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 ELOA3Q8NG57 546 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 DNAJA4Q8WW22 397 aaPredicted RBP13.21□□□□□ -0.29
TGFB1-202ENST00000597453 SLC25A36Q96CQ1 311 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 KTI12Q96EK9 354 aaPredicted RBP13.21□□□□□ -0.29
TGFB1-202ENST00000597453 TNFRSF13CQ96RJ3 184 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 NELFAQ9H3P2 528 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 ABCD2Q9UBJ2 740 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 RPS6KB2Q9UBS0 482 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 TAGLN3Q9UI15 199 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 RASD1Q9Y272 281 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 MALRD1Q5VYJ5 2156 aa13.21□□□□□ -0.3
TGFB1-202ENST00000597453 A0A1B0GWA3 101 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 A8MV72 311 aaPredicted RBP13.2□□□□□ -0.3
TGFB1-202ENST00000597453 ZNF587BE7ETH6 402 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 M0R3H8 397 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 TPST2O60704 377 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 FMO6PO60774 539 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 IFNA14P01570 189 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 RPS5P46782 204 aaKnown RBP13.2□□□□□ -0.3
TGFB1-202ENST00000597453 EFNA4P52798 201 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 DSCR9P59020 149 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 PSME3P61289 254 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 CHRNB3Q05901 458 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 LOXL1Q08397 574 aaPredicted RBP13.2□□□□□ -0.3
TGFB1-202ENST00000597453 SWI5Q1ZZU3 235 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 ULK3Q6PHR2 472 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 ABHD12BQ7Z5M8 362 aaPredicted RBP13.2□□□□□ -0.3
TGFB1-202ENST00000597453 MFSD8Q8NHS3 518 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 C10orf105Q8TEF2 133 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 FAM168AQ92567 244 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 BCL2L2Q92843 193 aaPredicted RBP13.2□□□□□ -0.3
TGFB1-202ENST00000597453 FBXO17Q96EF6 278 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 SLC38A2Q96QD8 506 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 WFDC6Q9BQY6 131 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 SEC61A2Q9H9S3 476 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 SPAG4Q9NPE6 437 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 OBP2BQ9NPH6 170 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 B3GAT1Q9P2W7 334 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 BAG5Q9UL15 447 aa13.2□□□□□ -0.3
TGFB1-202ENST00000597453 RRP15Q9Y3B9 282 aaKnown RBP13.2□□□□□ -0.3
TGFB1-202ENST00000597453 A0A096LPE4 126 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 A0A0B4J2E0 115 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 A0A1B0GX12 115 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 A0A1W2PPZ6 126 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 EBAG9O00559 213 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 SLC25A16P16260 332 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 KDELR2P33947 212 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 OR1Q1Q15612 314 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 NPTX1Q15818 432 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 ALG10BQ5I7T1 473 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 SWT1Q5T5J6 900 aaKnown RBP13.19□□□□□ -0.3
TGFB1-202ENST00000597453 HMBOX1Q6NT76 420 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 C5orf46Q6UWT4 87 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 CCDC197Q8NCU1 140 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 OR6T1Q8NGN1 323 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 PROX1Q92786 737 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 SLC47A1Q96FL8 570 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 PRR14Q9BWN1 585 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 PCDHAC1Q9H158 963 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 TMEM27Q9HBJ8 222 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 ARL8BQ9NVJ2 186 aa13.19□□□□□ -0.3
TGFB1-202ENST00000597453 IGKV1D-42A0A075B6H8 117 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 ARPC4-TTLL3A0A0A6YYG9 625 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 OR6C65A6NJZ3 312 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 FZD7O75084 574 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 ZNF432O94892 652 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 BMP4P12644 408 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 GSK3BP49841 420 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 CLDN17P56750 224 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 UBE2NP61088 152 aaKnown RBP13.18□□□□□ -0.3
TGFB1-202ENST00000597453 VLDLRP98155 873 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 ROR2Q01974 943 aaKnown RBP13.18□□□□□ -0.3
TGFB1-202ENST00000597453 KRT72Q14CN4 511 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 LRRC23Q53EV4 343 aaPredicted RBP13.18□□□□□ -0.3
TGFB1-202ENST00000597453 ZNF613Q6PF04 617 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 MYPOPQ86VE0 399 aaPredicted RBP13.18□□□□□ -0.3
TGFB1-202ENST00000597453 FITM2Q8N6M3 262 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 OR4D11Q8NGI4 311 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 VANGL1Q8TAA9 524 aaPredicted RBP13.18□□□□□ -0.3
TGFB1-202ENST00000597453 BCAS4Q8TDM0 211 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 SLC38A4Q969I6 547 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 TAAR8Q969N4 342 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 SORCS2Q96PQ0 1159 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 MCHR1Q99705 422 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 KCTD14Q9BQ13 255 aaPredicted RBP13.18□□□□□ -0.3
TGFB1-202ENST00000597453 LINC00470Q9BZP3 86 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 SELENONQ9NZV5 590 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 GMPR2Q9P2T1 348 aaKnown RBP13.18□□□□□ -0.3
TGFB1-202ENST00000597453 CRNNQ9UBG3 495 aaPredicted RBP13.18□□□□□ -0.3
TGFB1-202ENST00000597453 RCE1Q9Y256 329 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms