RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 ITGB1BP2Q9UKP3 347 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 V9GYQ6 96 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 CIB4A0PJX0 185 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 ZNF503-AS2A6NEH8 195 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 hCG_2039718K7EN88 272 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 SLC43A1O75387 559 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 PDE5AO76074 875 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 UBOX5O94941 541 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 ATE1O95260 518 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 IGF2P01344 180 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 CALB2P22676 271 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 AQP2P41181 271 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 MNAT1P51948 309 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 ARF1P84077 181 aaKnown RBP9.77□□□□□ -0.85
VRK3-210ENST00000596121 ROR2Q01974 943 aaKnown RBP9.77□□□□□ -0.85
VRK3-210ENST00000596121 PRKCDQ05655 676 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 RUNX1T1Q06455 604 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 RPL18Q07020 188 aaKnown RBP9.77□□□□□ -0.85
VRK3-210ENST00000596121 LAPTM4AQ15012 233 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 PAMR1Q6UXH9 720 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 TRPM8Q7Z2W7 1104 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 LURAP1LQ8IV03 231 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 NRMQ8IXM6 262 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 C20orf196Q8IYI0 205 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 OR1K1Q8NGR3 316 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 PYURFQ96I23 114 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 BOD1Q96IK1 185 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 HS6ST2Q96MM7 605 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 FUZQ9BT04 418 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 FNDC11Q9BVV2 318 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 GPR35Q9HC97 309 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 CCM2LQ9NUG4 571 aaPredicted RBP9.77□□□□□ -0.85
VRK3-210ENST00000596121 MAGEL2Q9UJ55 1249 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 MED31Q9Y3C7 131 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 NOX1Q9Y5S8 564 aa9.77□□□□□ -0.85
VRK3-210ENST00000596121 MAP1AP78559 2803 aaPredicted RBP9.76□□□□□ -0.85
VRK3-210ENST00000596121 A0A096LPE4 126 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 TRBV4-1A0A0J9YWV2 114 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 A0A1W2PPZ6 126 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 TCRBV5S2A0A599 114 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 ZNF587BE7ETH6 402 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 BLOC1S5-TXNDC5H3BN57 136 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 RPL36A-HNRNPH2H7BZ11 118 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 M0R3G1 203 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 F13BP05160 661 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 UMPSP11172 480 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 IFI30P13284 250 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 ZNF26P17031 533 aaPredicted RBP9.76□□□□□ -0.85
VRK3-210ENST00000596121 CD53P19397 219 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 ZNF83P51522 516 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 BIDP55957 195 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 TUBA1BP68363 451 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 TUBA4AP68366 448 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 BSPH1Q075Z2 132 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 CAMK2DQ13557 499 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 MELKQ14680 651 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 TRAM2Q15035 370 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 SEC23BQ15437 767 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 TBRG1Q3YBR2 411 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 SPATS1Q496A3 300 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 OR7E24Q6IFN5 339 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 PODNL1Q6PEZ8 512 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 CYP2R1Q6VVX0 501 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 ZNF704Q6ZNC4 412 aaPredicted RBP9.76□□□□□ -0.85
VRK3-210ENST00000596121 TUBA1AQ71U36 451 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 SLC35D2Q76EJ3 337 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 NANOGNBQ7Z5D8 188 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 P2RY8Q86VZ1 359 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 LRRC75AQ8NAA5 344 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 C1orf162Q8NEQ5 155 aaPredicted RBP9.76□□□□□ -0.85
VRK3-210ENST00000596121 SLC7A13Q8TCU3 470 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 TMEM54Q969K7 222 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 SLC7A6OSQ96CW6 309 aaPredicted RBP9.76□□□□□ -0.85
VRK3-210ENST00000596121 BPIFA2Q96DR5 249 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 DHRS1Q96LJ7 313 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 NSMCE2Q96MF7 247 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 USB1Q9BQ65 265 aaKnown RBP9.76□□□□□ -0.85
VRK3-210ENST00000596121 CRLF2Q9HC73 371 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 NDE1Q9NXR1 346 aa9.76□□□□□ -0.85
VRK3-210ENST00000596121 SAMD4AQ9UPU9 718 aaKnown RBP9.76□□□□□ -0.85
VRK3-210ENST00000596121 RAI1Q7Z5J4 1906 aaPredicted RBP9.76□□□□□ -0.85
VRK3-210ENST00000596121 A0A1W2PRQ8 180 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 OR6C65A6NJZ3 312 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 SHISA9B4DS77 424 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 CDC42EP2O14613 210 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 RNF13O43567 381 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 KRT33AO76009 404 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 SEC14L2O76054 403 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 OR6A2O95222 327 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 HIST1H2ABP04908 130 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 RPS4XP62701 263 aaKnown RBP9.75□□□□□ -0.85
VRK3-210ENST00000596121 SPOCK1Q08629 439 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 DGCR6Q14129 220 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 ACKR1Q16570 336 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 CEACAM16Q2WEN9 425 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 LRFN4Q6PJG9 635 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 MBOAT2Q6ZWT7 520 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 HIST3H2AQ7L7L0 130 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 GPR137CQ8N3F9 429 aa9.75□□□□□ -0.85
VRK3-210ENST00000596121 ANKK1Q8NFD2 765 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms