RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 TMEM33P57088 247 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 DSTNP60981 165 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 MRPS11P82912 194 aaKnown RBP8.55□□□□□ -1.04
LIG1-209ENST00000596104 IFFO1Q0D2I5 559 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 SCGB2A2Q13296 93 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 MAD2L1BPQ15013 274 aaPredicted RBP8.55□□□□□ -1.04
LIG1-209ENST00000596104 GSG1Q2KHT4 349 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 GTDC1Q4AE62 458 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 FAM69AQ5T7M9 428 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 SHQ1Q6PI26 577 aaKnown RBP8.55□□□□□ -1.04
LIG1-209ENST00000596104 NHLRC1Q6VVB1 395 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 THSD4Q6ZMP0 1018 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 H1FNTQ75WM6 255 aaPredicted RBP8.55□□□□□ -1.04
LIG1-209ENST00000596104 PEG10Q86TG7 708 aaKnown RBP8.55□□□□□ -1.04
LIG1-209ENST00000596104 WDFY1Q8IWB7 410 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 KIRREL3Q8IZU9 778 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 C3orf56Q8N813 242 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 ADPRHL1Q8NDY3 354 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 OR51F2Q8NH61 342 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 GCDHQ92947 438 aaPredicted RBP8.55□□□□□ -1.04
LIG1-209ENST00000596104 SLC35B4Q969S0 331 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 C12orf10Q9HB07 376 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 G6PC2Q9NQR9 355 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 ZNF275Q9NSD4 429 aaPredicted RBP8.55□□□□□ -1.04
LIG1-209ENST00000596104 PNPOQ9NVS9 261 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 ZNF224Q9NZL3 707 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 PCDHB10Q9UN67 800 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 ZNF232Q9UNY5 417 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 TRAV20A0A0B4J274 112 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 A0A0G2JPF8 293 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 A0A1B0GWA3 101 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 HNRNPCL2B2RXH8 293 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 HNRNPCL3B7ZW38 293 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 MS4A18H0YCH9 400 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 AKAP8O43823 692 aaKnown RBP8.54□□□□□ -1.04
LIG1-209ENST00000596104 OR2T1O43869 369 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 HNRNPCL1O60812 293 aaKnown RBP8.54□□□□□ -1.04
LIG1-209ENST00000596104 HPRP00739 348 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 HNRNPCL4P0DMR1 293 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 CD79AP11912 226 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 HLA-DOBP13765 273 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 EPHA1P21709 976 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 BGNP21810 368 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 CRATP43155 626 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 PIGFQ07326 219 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 MFSD13AQ14CX5 517 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 TRMT5Q32P41 509 aaKnown RBP8.54□□□□□ -1.04
LIG1-209ENST00000596104 MS4A18Q3C1V0 323 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 CARD17Q5XLA6 110 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 REP15Q6BDI9 236 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 C5orf46Q6UWT4 87 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 ZNF813Q6ZN06 617 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 LSMEM1Q8N8F7 131 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 GLB1L3Q8NCI6 653 aaPredicted RBP8.54□□□□□ -1.04
LIG1-209ENST00000596104 SLC38A4Q969I6 547 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 VPS33AQ96AX1 596 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 SLC41A3Q96GZ6 507 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 LRR1Q96L50 414 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 EMC6Q9BV81 110 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 TMEM109Q9BVC6 243 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 RBM4Q9BWF3 364 aaKnown RBP8.54□□□□□ -1.04
LIG1-209ENST00000596104 ARMC7Q9H6L4 198 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 TPT1P8Q9HAU6 139 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 BCL2L10Q9HD36 194 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 KLHL14Q9P2G3 628 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 FZR1Q9UM11 496 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 IFT52Q9Y366 437 aa8.54□□□□□ -1.04
LIG1-209ENST00000596104 TRAV36DV7A0A075B6V5 113 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 LOC105371242A0A075B767 164 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 A0A087WUJ7 227 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 TRIM77I1YAP6 450 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 PPIHO43447 177 aaKnown RBP8.53□□□□□ -1.04
LIG1-209ENST00000596104 PNPP00491 289 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 NUDT7P0C024 238 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 BMP2P12643 396 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 B4GALT1P15291 398 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 CBLP22681 906 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 HTR2AP28223 471 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 GIPRP48546 466 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 PTDSS1P48651 473 aaKnown RBP8.53□□□□□ -1.04
LIG1-209ENST00000596104 AQP5P55064 265 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 RPS23P62266 143 aaKnown RBP8.53□□□□□ -1.04
LIG1-209ENST00000596104 VSNL1P62760 191 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 MYBPC1Q00872 1141 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 BST1Q10588 318 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 MPP2Q14168 576 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 ZNF311Q5JNZ3 666 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 FAHD2BQ6P2I3 314 aaPredicted RBP8.53□□□□□ -1.04
LIG1-209ENST00000596104 NET1Q7Z628 596 aaPredicted RBP8.53□□□□□ -1.04
LIG1-209ENST00000596104 COMTD1Q86VU5 262 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 ZNF584Q8IVC4 421 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 UEVLDQ8IX04 471 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 OR6S1Q8NH40 331 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 FAHD2AQ96GK7 314 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 TXNDC15Q96J42 360 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 ZBTB18Q99592 522 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 ZNF416Q9BWM5 594 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 TMPRSS13Q9BYE2 586 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 DENND2DQ9H6A0 471 aaPredicted RBP8.53□□□□□ -1.04
LIG1-209ENST00000596104 ZNF385DQ9H6B1 395 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms