RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 FKRPQ9H9S5 495 aa13.22□□□□□ -0.29
TRIM28-205ENST00000595028 OBP2BQ9NPH6 170 aa13.22□□□□□ -0.29
TRIM28-205ENST00000595028 ZNF701Q9NV72 531 aaPredicted RBP13.22□□□□□ -0.29
TRIM28-205ENST00000595028 GMPR2Q9P2T1 348 aaKnown RBP13.22□□□□□ -0.29
TRIM28-205ENST00000595028 LAMP3Q9UQV4 416 aa13.22□□□□□ -0.29
TRIM28-205ENST00000595028 NOX1Q9Y5S8 564 aa13.22□□□□□ -0.29
TRIM28-205ENST00000595028 RPL36A-HNRNPH2H7BZ11 118 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 NME4O00746 187 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 PLPP3O14495 311 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 SNX3O60493 162 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 OR5F1O95221 314 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 WNT11O96014 354 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 INHBBP09529 407 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 TAS2R41P59536 307 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 PRPS1P60891 318 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 LIPEQ05469 1076 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 PGGHGQ32M88 737 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 PRSS57Q6UWY2 283 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 GPR137CQ8N3F9 429 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 SMAP2Q8WU79 429 aaPredicted RBP13.21□□□□□ -0.29
TRIM28-205ENST00000595028 BCL2L2Q92843 193 aaPredicted RBP13.21□□□□□ -0.29
TRIM28-205ENST00000595028 HOPXQ9BPY8 73 aaPredicted RBP13.21□□□□□ -0.29
TRIM28-205ENST00000595028 C1QTNF6Q9BXI9 259 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 NELFAQ9H3P2 528 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 EFCAB1Q9HAE3 211 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 MED29Q9NX70 200 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 CISD1Q9NZ45 108 aaKnown RBP13.21□□□□□ -0.29
TRIM28-205ENST00000595028 TLN2Q9Y4G6 2542 aa13.21□□□□□ -0.29
TRIM28-205ENST00000595028 ARPC4-TTLL3A0A0A6YYG9 625 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 SHOX2O60902 331 aaPredicted RBP13.2□□□□□ -0.3
TRIM28-205ENST00000595028 SERPINI2O75830 405 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 CH25HO95992 272 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 HEXAP06865 529 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 ADORA3P0DMS8 318 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 OR1E2P47887 323 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 GSK3BP49841 420 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 SLC22A25Q6T423 547 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 NHLRC1Q6VVB1 395 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 SLC46A3Q7Z3Q1 461 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 YTHDF3Q7Z739 585 aaKnown RBP13.2□□□□□ -0.3
TRIM28-205ENST00000595028 PXKQ7Z7A4 578 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 MAGEE2Q8TD90 523 aaPredicted RBP13.2□□□□□ -0.3
TRIM28-205ENST00000595028 CMTM5Q96DZ9 223 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 ALG2Q9H553 416 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 GPR35Q9HC97 309 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 NANSQ9NR45 359 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 FAIMQ9NVQ4 179 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 ZNF229Q9UJW7 825 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 ZANQ9Y493 2812 aa13.2□□□□□ -0.3
TRIM28-205ENST00000595028 SLC35F4A4IF30 521 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 GMNCA6NCL1 334 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 M0R3G1 203 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 OVOL3O00110 214 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 CXCR6O00574 342 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 NDUFAB1O14561 156 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 THRBP10828 461 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 AHCYP23526 432 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 PRDX6P30041 224 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 RBM34P42696 430 aaKnown RBP13.19□□□□□ -0.3
TRIM28-205ENST00000595028 GYS2P54840 703 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 UGT2B15P54855 530 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 ATP5J2P56134 94 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 UBE2NP61088 152 aaKnown RBP13.19□□□□□ -0.3
TRIM28-205ENST00000595028 GNGT1P63211 74 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 SELENOWP63302 87 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 ARF1P84077 181 aaKnown RBP13.19□□□□□ -0.3
TRIM28-205ENST00000595028 PIN1Q13526 163 aaPredicted RBP13.19□□□□□ -0.3
TRIM28-205ENST00000595028 CEACAM16Q2WEN9 425 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 CARD17Q5XLA6 110 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 ANKRD16Q6P6B7 361 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 B3GLCTQ6Y288 498 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 NANOGNBQ7Z5D8 188 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 CPLX4Q7Z7G2 160 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 DTX2Q86UW9 622 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 NKAIN4Q8IVV8 208 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 WDFY1Q8IWB7 410 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 C20orf196Q8IYI0 205 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 TMEM255BQ8WV15 326 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 LZICQ8WZA0 190 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 TXNDC15Q96J42 360 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 TPD52L3Q96J77 140 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 PRRC1Q96M27 445 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 Q96MF0 132 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 TRAF4Q9BUZ4 470 aaPredicted RBP13.19□□□□□ -0.3
TRIM28-205ENST00000595028 EMC6Q9BV81 110 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 CRLF2Q9HC73 371 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 MEPEQ9NQ76 525 aaPredicted RBP13.19□□□□□ -0.3
TRIM28-205ENST00000595028 ABCD2Q9UBJ2 740 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 RIMS3Q9UJD0 308 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 POU2F3Q9UKI9 436 aa13.19□□□□□ -0.3
TRIM28-205ENST00000595028 A0A096LPE4 126 aa13.18□□□□□ -0.3
TRIM28-205ENST00000595028 A0A1W2PPZ6 126 aa13.18□□□□□ -0.3
TRIM28-205ENST00000595028 E7EQL1 145 aa13.18□□□□□ -0.3
TRIM28-205ENST00000595028 C11orf98E9PRG8 122 aa13.18□□□□□ -0.3
TRIM28-205ENST00000595028 OR6A2O95222 327 aa13.18□□□□□ -0.3
TRIM28-205ENST00000595028 IGF2P01344 180 aa13.18□□□□□ -0.3
TRIM28-205ENST00000595028 MT-ND1P03886 318 aa13.18□□□□□ -0.3
TRIM28-205ENST00000595028 ASAH2BP0C7U1 165 aa13.18□□□□□ -0.3
TRIM28-205ENST00000595028 UMPSP11172 480 aa13.18□□□□□ -0.3
TRIM28-205ENST00000595028 PAX7P23759 505 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms