RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 NUDT6P53370 316 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 OTUD3Q5T2D3 398 aaPredicted RBP10.94□□□□□ -0.66
UPF1-203ENST00000594504 GLYATQ6IB77 296 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 TMEM108Q6UXF1 575 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 LINC00114Q6XXX2 140 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 VTCN1Q7Z7D3 282 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 TSPYL5Q86VY4 417 aaPredicted RBP10.94□□□□□ -0.66
UPF1-203ENST00000594504 HIPK1Q86Z02 1210 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 ARHGAP24Q8N264 748 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 FAM156AQ8NDB6 213 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 OR10H5Q8NGA6 315 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 OR6S1Q8NH40 331 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 GEMIN6Q8WXD5 167 aaKnown RBP10.94□□□□□ -0.66
UPF1-203ENST00000594504 MPP4Q96JB8 637 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 DHRS9Q9BPW9 319 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 PTDSS2Q9BVG9 487 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 REPIN1Q9BWE0 567 aaKnown RBP10.94□□□□□ -0.66
UPF1-203ENST00000594504 GORASP2Q9H8Y8 452 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 SLC7A10Q9NS82 523 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 CBLN4Q9NTU7 201 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 FAIMQ9NVQ4 179 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 ASB6Q9NWX5 421 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 SLC7A7Q9UM01 511 aa10.94□□□□□ -0.66
UPF1-203ENST00000594504 ANK3Q12955 4377 aaKnown RBP10.94□□□□□ -0.66
UPF1-203ENST00000594504 ALPK2Q86TB3 2170 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 FTCDNL1E5RQL4 147 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 AKR7A3O95154 331 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 VAMP5O95183 116 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 OR5F1O95221 314 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 LYPD3O95274 346 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 THY1P04216 161 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 IFNW1P05000 195 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 THRBP10828 461 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 PTAFRP25105 342 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 GTF2E2P29084 291 aaKnown RBP10.93□□□□□ -0.66
UPF1-203ENST00000594504 TAS2R41P59536 307 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 SLC17A1Q14916 467 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 MFSD13AQ14CX5 517 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 RAB35Q15286 201 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 IFI44LQ53G44 452 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 TSPO2Q5TGU0 170 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 CASP12Q6UXS9 341 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 RINLQ6ZS11 566 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 FKBP9P1Q75LS8 142 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 FBXL14Q8N1E6 418 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 MUC15Q8N387 334 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 ZNF525Q8N782 197 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 TMEM99Q8N816 258 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 TAAR8Q969N4 342 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 SLC25A36Q96CQ1 311 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 SLC41A3Q96GZ6 507 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 RADILQ96JH8 1075 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 HSH2DQ96JZ2 352 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 ADAD1Q96M93 576 aaKnown RBP10.93□□□□□ -0.66
UPF1-203ENST00000594504 ZNF426Q9BUY5 554 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 SF3B5Q9BWJ5 86 aaKnown RBP10.93□□□□□ -0.66
UPF1-203ENST00000594504 C1orf21Q9H246 121 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 BARX1Q9HBU1 254 aaPredicted RBP10.93□□□□□ -0.66
UPF1-203ENST00000594504 DCAF13Q9NV06 445 aaKnown RBP10.93□□□□□ -0.66
UPF1-203ENST00000594504 TAS2R16Q9NYV7 291 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 UPB1Q9UBR1 384 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 SAMD4AQ9UPU9 718 aaKnown RBP10.93□□□□□ -0.66
UPF1-203ENST00000594504 MGAT4BQ9UQ53 548 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 SNX13Q9Y5W8 968 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 FLVCR1Q9Y5Y0 555 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 ATP23Q9Y6H3 246 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 HIVEP2P31629 2446 aa10.93□□□□□ -0.66
UPF1-203ENST00000594504 RNF212BA8MTL3 300 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 A8MV72 311 aaPredicted RBP10.92□□□□□ -0.66
UPF1-203ENST00000594504 PDLIM1O00151 329 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 LY6HO94772 140 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 UBOX5O94941 541 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 CDH2P19022 906 aaPredicted RBP10.92□□□□□ -0.66
UPF1-203ENST00000594504 IFNA8P32881 189 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 P2RY4P51582 365 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 PIN1Q13526 163 aaPredicted RBP10.92□□□□□ -0.66
UPF1-203ENST00000594504 TMEM225Q6GV28 225 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 TTC33Q6PID6 262 aaPredicted RBP10.92□□□□□ -0.66
UPF1-203ENST00000594504 KLHL17Q6TDP4 642 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 WDR88Q6ZMY6 472 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 PHC2Q8IXK0 858 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 NANOS1Q8WY41 292 aaKnown RBP10.92□□□□□ -0.66
UPF1-203ENST00000594504 PRRC1Q96M27 445 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 SLC19A3Q9BZV2 496 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 AMBRA1Q9C0C7 1298 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 HEATR1Q9H583 2144 aaKnown RBP10.92□□□□□ -0.66
UPF1-203ENST00000594504 SLC17A5Q9NRA2 495 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 TAS2R1Q9NYW7 299 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 MALT1Q9UDY8 824 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 RIMS3Q9UJD0 308 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 PRPF19Q9UMS4 504 aaKnown RBP10.92□□□□□ -0.66
UPF1-203ENST00000594504 RASD1Q9Y272 281 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 CORINQ9Y5Q5 1042 aa10.92□□□□□ -0.66
UPF1-203ENST00000594504 M0R082 166 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 ARPC2O15144 300 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 MT-ATP6P00846 226 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 BGLAPP02818 100 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 MSX2P35548 267 aaPredicted RBP10.91□□□□□ -0.66
UPF1-203ENST00000594504 RBM34P42696 430 aaKnown RBP10.91□□□□□ -0.66
UPF1-203ENST00000594504 ST3GAL3Q11203 375 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms