RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PRKCDQ05655 676 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 DUSP7Q16829 419 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 SLX4IPQ5VYV7 408 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 USP43Q70EL4 1123 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 AKAP14Q86UN6 197 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 NAXEQ8NCW5 288 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 LILRB4Q8NHJ6 448 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 GABARAPL3Q9BY60 117 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 CCDC59Q9P031 241 aaKnown RBP17.57■□□□□ 0.4
LSM4-203ENST00000593829 MCTS1Q9ULC4 181 aaKnown RBP17.57■□□□□ 0.4
LSM4-203ENST00000593829 TMED7-TICAM2A0A0A6YYA0 188 aa17.56■□□□□ 0.4
LSM4-203ENST00000593829 SYT5O00445 386 aa17.56■□□□□ 0.4
LSM4-203ENST00000593829 WBP4O75554 376 aaKnown RBP17.56■□□□□ 0.4
LSM4-203ENST00000593829 FABP3P05413 133 aa17.56■□□□□ 0.4
LSM4-203ENST00000593829 KCNJ5P48544 419 aa17.56■□□□□ 0.4
LSM4-203ENST00000593829 RGS8P57771 180 aaPredicted RBP17.56■□□□□ 0.4
LSM4-203ENST00000593829 CDSNQ15517 529 aa17.56■□□□□ 0.4
LSM4-203ENST00000593829 FNDC9Q8TBE3 224 aa17.56■□□□□ 0.4
LSM4-203ENST00000593829 TMED7Q9Y3B3 224 aa17.56■□□□□ 0.4
LSM4-203ENST00000593829 PCNX1Q96RV3 2341 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 SYNGR4O95473 234 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 CLDN1O95832 211 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 LGI1O95970 557 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 IFNA14P01570 189 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 MAP2K6P52564 334 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 ZNF136P52737 540 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 DGCR6Q14129 220 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 SYT14P1Q58G82 188 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 GPR32P1Q8NGA4 272 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 OR5B2Q96R09 309 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 PRRG4Q9BZD6 226 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 KIAA1549Q9HCM3 1950 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 RGS13O14921 159 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 TMIGD3P0DMS9 266 aaPredicted RBP17.55■□□□□ 0.4
LSM4-203ENST00000593829 TFPIP10646 304 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 FCGR2AP12318 317 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 CXCR1P25024 350 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 CTSSP25774 331 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 KDELR2P33947 212 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 ETV6P41212 452 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 CLK1P49759 484 aaKnown RBP17.55■□□□□ 0.4
LSM4-203ENST00000593829 CRYBA2P53672 197 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 OR2A2Q6IF42 318 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 CBLL1Q75N03 491 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 MAMDC2Q7Z304 686 aaPredicted RBP17.55■□□□□ 0.4
LSM4-203ENST00000593829 APH1BQ8WW43 257 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 RPL3LQ92901 407 aaKnown RBP17.55■□□□□ 0.4
LSM4-203ENST00000593829 HRASLS5Q96KN8 279 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 ZNF559Q9BR84 538 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 TRIM2Q9C040 744 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 KRT84Q9NSB2 600 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 FKBP14Q9NWM8 211 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 PDP1Q9P0J1 537 aaPredicted RBP17.55■□□□□ 0.4
LSM4-203ENST00000593829 RPS6KB2Q9UBS0 482 aa17.55■□□□□ 0.4
LSM4-203ENST00000593829 ZNF629Q9UEG4 869 aaPredicted RBP17.55■□□□□ 0.4
LSM4-203ENST00000593829 KLF2Q9Y5W3 355 aaPredicted RBP17.55■□□□□ 0.4
LSM4-203ENST00000593829 DOPEY2Q9Y3R5 2298 aa17.54■□□□□ 0.4
LSM4-203ENST00000593829 A0A1W2PNR3 127 aa17.54■□□□□ 0.4
LSM4-203ENST00000593829 ZNF208O43345 1280 aa17.54■□□□□ 0.4
LSM4-203ENST00000593829 RANBP3LQ86VV4 465 aaPredicted RBP17.54■□□□□ 0.4
LSM4-203ENST00000593829 LSMEM1Q8N8F7 131 aa17.54■□□□□ 0.4
LSM4-203ENST00000593829 CPNE4Q96A23 557 aaPredicted RBP17.54■□□□□ 0.4
LSM4-203ENST00000593829 INTS12Q96CB8 462 aaKnown RBP17.54■□□□□ 0.4
LSM4-203ENST00000593829 EPYCQ99645 322 aa17.54■□□□□ 0.4
LSM4-203ENST00000593829 ARHGDIGQ99819 225 aa17.54■□□□□ 0.4
LSM4-203ENST00000593829 TESQ9UGI8 421 aaKnown RBP17.54■□□□□ 0.4
LSM4-203ENST00000593829 USP9YO00507 2555 aaPredicted RBP17.54■□□□□ 0.4
LSM4-203ENST00000593829 TMEM72A0PK05 275 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 DVL2O14641 736 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 AIREO43918 545 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 LCKP06239 509 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 OPRM1P35372 400 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 RAC3P60763 192 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 NPRL3Q12980 569 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 STEAP3Q658P3 488 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 SLC46A3Q7Z3Q1 461 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 LIX1LQ8IVB5 337 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 GCNT2Q8N0V5 402 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 KBTBD8Q8NFY9 601 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 C3orf49Q96BT1 292 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 DDIT4LQ96D03 193 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 WFDC6Q9BQY6 131 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 RNF122Q9H9V4 155 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 NPAP1Q9NZP6 1156 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 PLEKHB1Q9UF11 243 aaPredicted RBP17.53■□□□□ 0.4
LSM4-203ENST00000593829 PSORS1C1Q9UIG5 152 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 M0R082 166 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 M0R3H8 397 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 AQP8O94778 261 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 ZNF682O95780 498 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 IL18BPO95998 194 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 BMP5P22003 454 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 HTR2AP28223 471 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 SMN1Q16637 294 aaKnown RBP17.53■□□□□ 0.4
LSM4-203ENST00000593829 SLC25A35Q3KQZ1 300 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 TMPPEQ6ZT21 453 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 ENTHD1Q8IYW4 607 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 PROX1Q92786 737 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 MYDGFQ969H8 173 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 SRXN1Q9BYN0 137 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms