RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 NPIPB9F8W1W9 429 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 ANKRD28O15084 1053 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 BIRC5O15392 142 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 RGS16O15492 202 aaPredicted RBP6.66□□□□□ -1.34
VMP1-213ENST00000591877 SCN2BO60939 215 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 HSPA4LO95757 839 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 LINGO3P0C6S8 592 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 CD1EP15812 388 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 ZNF17P17021 662 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 PRPS1L1P21108 318 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 SHC1P29353 583 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 LCN1P31025 176 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 CCKARP32238 428 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 RPL3P39023 403 aaKnown RBP6.66□□□□□ -1.34
VMP1-213ENST00000591877 CPA2P48052 419 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 CLDN8P56748 225 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 ABCE1P61221 599 aaKnown RBP6.66□□□□□ -1.34
VMP1-213ENST00000591877 EEF1A1P68104 462 aaKnown RBP6.66□□□□□ -1.34
VMP1-213ENST00000591877 ZNF117Q03924 483 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 GSTA3Q16772 222 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 SMU1Q2TAY7 513 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 NDUFAF6Q330K2 333 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 KLHL26Q53HC5 615 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 DCST2Q5T1A1 773 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 EEF1A1P5Q5VTE0 462 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 OR4F3Q6IEY1 312 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 OR2A2Q6IF42 318 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 CHMP1BQ7LBR1 199 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 OLIG3Q7RTU3 272 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 CROCCP2Q86T23 111 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 CLECL1Q8IZS7 167 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 CLEC4FQ8N1N0 589 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 GTPBP8Q8N3Z3 284 aaPredicted RBP6.66□□□□□ -1.34
VMP1-213ENST00000591877 PAQR4Q8N4S7 273 aaPredicted RBP6.66□□□□□ -1.34
VMP1-213ENST00000591877 NKAIN3Q8N8D7 197 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 CNEP1R1Q8N9A8 125 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 OR52N4Q8NGI2 321 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 OR5D16Q8NGK9 328 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 FAM110DQ8TAY7 271 aaPredicted RBP6.66□□□□□ -1.34
VMP1-213ENST00000591877 SFXN5Q8TD22 340 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 PERPQ96FX8 193 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 PGM2Q96G03 612 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 SH3YL1Q96HL8 342 aaPredicted RBP6.66□□□□□ -1.34
VMP1-213ENST00000591877 PPP1R36Q96LQ0 422 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 KLHL15Q96M94 604 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 RNF145Q96MT1 663 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 DACH2Q96NX9 599 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 WFIKKN1Q96NZ8 548 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 OR7D2Q96RA2 312 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 FOXC2Q99958 501 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 DUSP26Q9BV47 211 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 MLST8Q9BVC4 326 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 PCDHB16Q9NRJ7 776 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 HSPB7Q9UBY9 170 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 HAO1Q9UJM8 370 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 ICAM5Q9UMF0 924 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 ZNF175Q9Y473 711 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 ZNF469Q96JG9 3925 aaPredicted RBP6.66□□□□□ -1.34
VMP1-213ENST00000591877 A0A087WZY1 265 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.65□□□□□ -1.34
VMP1-213ENST00000591877 OR6C68A6NDL8 312 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 DEFB108AA8MXU0 73 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 ADAMDEC1O15204 470 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 TM9SF1O15321 606 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 CXCL13O43927 109 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 PGM3O95394 542 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 C1QCP02747 245 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 BGNP21810 368 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 CD79BP40259 229 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 SLC1A6P48664 564 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 PCYT1AP49585 367 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 RPL14P50914 215 aaKnown RBP6.65□□□□□ -1.34
VMP1-213ENST00000591877 FOXF1Q12946 379 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 TOMM34Q15785 309 aaPredicted RBP6.65□□□□□ -1.34
VMP1-213ENST00000591877 SGCBQ16585 318 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 LSM12Q3MHD2 195 aaKnown RBP6.65□□□□□ -1.34
VMP1-213ENST00000591877 CEP85LQ5SZL2 805 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 TMEM65Q6PI78 240 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 PAMR1Q6UXH9 720 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 SLC46A3Q7Z3Q1 461 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 RNF144BQ7Z419 303 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 C6orf120Q7Z4R8 191 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 MISPQ8IVT2 679 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 NATD1Q8N6N6 113 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 SCAIQ8N9R8 606 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 OR8J2Q8NGG1 315 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 OR10D3Q8NH80 312 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 B4GALNT2Q8NHY0 566 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 CHMP6Q96FZ7 201 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 MARK4Q96L34 752 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 SDF2Q99470 211 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 TMEM185BQ9H7F4 350 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 C20orf141Q9NUB4 165 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 ATAD3AQ9NVI7 634 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 KLHL28Q9NXS3 571 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 CLEC4AQ9UMR7 237 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 EIF3LQ9Y262 564 aaKnown RBP6.65□□□□□ -1.34
VMP1-213ENST00000591877 CARD8Q9Y2G2 431 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 RAP2CQ9Y3L5 183 aa6.65□□□□□ -1.34
VMP1-213ENST00000591877 NIPBLQ6KC79 2804 aaeCLIP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms