RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SESN3P58005 492 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 HPCAP84074 193 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 SLC25A3Q00325 362 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 SKP2Q13309 424 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 CYP51A1Q16850 503 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 ARHGAP11BQ3KRB8 267 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 RUNDC3AQ59EK9 446 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 OR4F3Q6IEY1 312 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 C8orf82Q6P1X6 216 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-226ENST00000591534 PGM2L1Q6PCE3 622 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 KLHL24Q6TFL4 600 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 RINLQ6ZS11 566 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 GRINAQ7Z429 371 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 C6orf120Q7Z4R8 191 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 ABHD12BQ7Z5M8 362 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-226ENST00000591534 PHC2Q8IXK0 858 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 C17orf78Q8N4C9 275 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 C1orf162Q8NEQ5 155 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-226ENST00000591534 OR52N5Q8NH56 324 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 OR5AK3PQ8NH89 298 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 TEX37Q96LM6 180 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 ZNF300Q96RE9 604 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-226ENST00000591534 SLC35A5Q9BS91 424 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 VCXQ9H320 206 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 SERHL2Q9H4I8 314 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 TPT1P8Q9HAU6 139 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 SLC52A3Q9NQ40 469 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 CHRNA9Q9UGM1 479 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 ING1Q9UK53 422 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-226ENST00000591534 FBXO9Q9UK97 447 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-226ENST00000591534 BAG5Q9UL15 447 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 SAMD4AQ9UPU9 718 aaKnown RBP8.29□□□□□ -1.08
BRCA1-226ENST00000591534 ANGPT4Q9Y264 503 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 AMDHD2Q9Y303 409 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 SF3B6Q9Y3B4 125 aaKnown RBP8.29□□□□□ -1.08
BRCA1-226ENST00000591534 SNX13Q9Y5W8 968 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 ATP23Q9Y6H3 246 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 ELOVL7A1L3X0 281 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 VSTM5A8MXK1 200 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 FAM220BPB1ANY3 271 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 C5orf58C9J3I9 102 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 E7EQL1 145 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 M0R1B8 84 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 NDUFS8O00217 210 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 SCN2BO60939 215 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 SERPINB7O75635 380 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 H6PDO95479 791 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 UBTFL6P0CB48 400 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-226ENST00000591534 USF1P22415 310 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-226ENST00000591534 IL12AP29459 219 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 APOBEC3AP31941 199 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-226ENST00000591534 IFNA8P32881 189 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 KHKP50053 298 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 ACTR3P61158 418 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 HBA1P69905 142 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 SLC35A1P78382 337 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 GK3PQ14409 553 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 NDUFAF6Q330K2 333 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 ABLIM2Q6H8Q1 611 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 SLC2A7Q6PXP3 512 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 DLEU7Q6UYE1 221 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 PATL1Q86TB9 770 aaKnown RBP8.28□□□□□ -1.08
BRCA1-226ENST00000591534 ATG4DQ86TL0 474 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-226ENST00000591534 ANKRD46Q86W74 232 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 SLC15A3Q8IY34 581 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 ZNF540Q8NDQ6 660 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 OR5D16Q8NGK9 328 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 DDIT4LQ96D03 193 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 NEURL3Q96EH8 262 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 RSRC1Q96IZ7 334 aaKnown RBP8.28□□□□□ -1.08
BRCA1-226ENST00000591534 SLC35G5Q96KT7 338 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 NSMCE2Q96MF7 247 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 MUS81Q96NY9 551 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 ZNF607Q96SK3 696 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 KCNS3Q9BQ31 491 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 OSBPL10Q9BXB5 764 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 QRSL1Q9H0R6 528 aaKnown RBP8.28□□□□□ -1.08
BRCA1-226ENST00000591534 TMEM38AQ9H6F2 299 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 KAT8Q9H7Z6 458 aaKnown RBP8.28□□□□□ -1.08
BRCA1-226ENST00000591534 GORASP2Q9H8Y8 452 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 MOV10Q9HCE1 1003 aaKnown RBP8.28□□□□□ -1.08
BRCA1-226ENST00000591534 MYOZ1Q9NP98 299 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-226ENST00000591534 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-226ENST00000591534 ADPRHL2Q9NX46 363 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 PRR13Q9NZ81 148 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 NPAP1Q9NZP6 1156 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 MALT1Q9UDY8 824 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 KCNS2Q9ULS6 477 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 TRAPPC4Q9Y296 219 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 SLC9A8Q9Y2E8 581 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 WDR45Q9Y484 360 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 SLC25A15Q9Y619 301 aa8.28□□□□□ -1.08
BRCA1-226ENST00000591534 CHD3Q12873 2000 aaKnown RBP8.27□□□□□ -1.09
BRCA1-226ENST00000591534 HEATR5AQ86XA9 2040 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 RNF103-CHMP3A0A140T963 221 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 PRORSD1PA6NEY8 169 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 GPRIN2O60269 458 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 LMX1BO60663 402 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 UGT2B17O75795 530 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 CPSF4O95639 269 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms