RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 BAG1Q99933 345 aaPredicted RBP5.36□□□□□ -1.55
DNMT1-222ENST00000590619 CNTD2Q9H8S5 307 aa5.36□□□□□ -1.55
DNMT1-222ENST00000590619 SLC7A8Q9UHI5 535 aa5.36□□□□□ -1.55
DNMT1-222ENST00000590619 TRIM33Q9UPN9 1127 aa5.36□□□□□ -1.55
DNMT1-222ENST00000590619 USH1CQ9Y6N9 552 aa5.36□□□□□ -1.55
DNMT1-222ENST00000590619 HUWE1Q7Z6Z7 4374 aaKnown RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 A0A0U1RQK1 487 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 HMX2A2RU54 273 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 RBMY1BA6NDE4 496 aaKnown RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 RBMY1EA6NEQ0 496 aaKnown RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 ZNF99A8MXY4 864 aaPredicted RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 POC1B-GALNT4F8VUJ3 575 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 PDPK1O15530 556 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 VAMP5O95183 116 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 IGHV3-13P01766 116 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 MT-ND5P03915 603 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 SERPINA5P05154 406 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 GPIP06744 558 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 CHRM4P08173 479 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 RPS17P08708 135 aaKnown RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 RBMY1DP0C7P1 496 aaKnown RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 PATE4P0C8F1 98 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 CCL2P13500 99 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 EFNA1P20827 205 aaPredicted RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 UQCRC2P22695 453 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 TACR3P29371 465 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 GABRA5P31644 462 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 TGFBR2P37173 567 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 EFNB2P52799 333 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 UCP2P55851 309 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 CLDN17P56750 224 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 GLO1Q04760 184 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 PDE7AQ13946 482 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 ARHGAP11BQ3KRB8 267 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 TTMPQ5BVD1 217 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 TMEM255AQ5JRV8 349 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 SPDYAQ5MJ70 313 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 DHRS7BQ6IAN0 325 aaPredicted RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 NOXRED1Q6NXP6 359 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 EMBQ6PCB8 327 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 C1orf122Q6ZSJ8 110 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 C3orf62Q6ZUJ4 267 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 EIF3MQ7L2H7 374 aaKnown RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 RNF144BQ7Z419 303 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 LDLRAD3Q86YD5 345 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 GALNT4Q8N4A0 578 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 FITM2Q8N6M3 262 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 FAM71CQ8NEG0 241 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 PPP1R35Q8TAP8 253 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 GRK7Q8WTQ7 553 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 GEMIN6Q8WXD5 167 aaKnown RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 CDKL2Q92772 493 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 ZG16BQ96DA0 208 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 NUDT16L1Q9BRJ7 211 aaKnown RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 SSBP3Q9BWW4 388 aaPredicted RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 ACTRT3Q9BYD9 372 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 IQCGQ9H095 443 aaKnown RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 OR51B6Q9H340 312 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 DPAGT1Q9H3H5 408 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 NANOGQ9H9S0 305 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 ZCCHC3Q9NUD5 404 aaKnown RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 TMEM106BQ9NUM4 274 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 ACOXLQ9NUZ1 547 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 RCE1Q9Y256 329 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 POLR3HQ9Y535 204 aaPredicted RBP5.35□□□□□ -1.55
DNMT1-222ENST00000590619 TIMM22Q9Y584 194 aa5.35□□□□□ -1.55
DNMT1-222ENST00000590619 TCRBV9S1A1TA0A576 114 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 SERTM1A2A2V5 107 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 CEACAM18A8MTB9 384 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 ADARB2-AS1A8MUL3 147 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 RNASEK-C17orf49H0YIS7 233 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 M0R3G1 203 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 SCN2BO60939 215 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 LCKP06239 509 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 CD28P10747 220 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 LYL1P12980 280 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 CD33P20138 364 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 RPL4P36578 427 aaKnown RBP5.34□□□□□ -1.55
DNMT1-222ENST00000590619 KIR2DS4P43632 304 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 HTR3AP46098 478 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 MMP16P51512 607 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 POLR2HP52434 150 aaKnown RBP5.34□□□□□ -1.55
DNMT1-222ENST00000590619 MAP2K6P52564 334 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 BTG1P62324 171 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 GNB2P62879 340 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 PLAURQ03405 335 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 CLCQ05315 142 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 EGFEM1PQ0D2K5 195 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 KIAA0040Q15053 153 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 UNC50Q53HI1 259 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 MROH9Q5TGP6 573 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 KLC3Q6P597 504 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 ZNF627Q7L945 461 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 RNF130Q86XS8 419 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 CTAGE3PQ8IX95 158 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 MUC20Q8N307 709 aaPredicted RBP5.34□□□□□ -1.55
DNMT1-222ENST00000590619 GPR137CQ8N3F9 429 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 ZNF283Q8N7M2 679 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 OR4F17Q8NGA8 305 aa5.34□□□□□ -1.55
DNMT1-222ENST00000590619 ZFP28Q8NHY6 868 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms