RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 BTN1A1Q13410 526 aa15.73■□□□□ 0.11
SMARCA4-215ENST00000590574 SPIN3Q5JUX0 258 aa15.73■□□□□ 0.11
SMARCA4-215ENST00000590574 TMEM244Q5VVB8 128 aa15.73■□□□□ 0.11
SMARCA4-215ENST00000590574 MAP3K3Q99759 626 aa15.73■□□□□ 0.11
SMARCA4-215ENST00000590574 SERGEFQ9UGK8 458 aa15.73■□□□□ 0.11
SMARCA4-215ENST00000590574 CDK2P24941 298 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 CD79BP40259 229 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 IL13RA1P78552 427 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 EEF1A2Q05639 463 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 MEF2DQ14814 521 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 MLF2Q15773 248 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 MEP1BQ16820 701 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 LIPNQ5VXI9 398 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 OR5T2Q8NGG2 359 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 PMM1Q92871 262 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 OR1F2PQ96R84 312 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 CYSLTR2Q9NS75 346 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 EXOGQ9Y2C4 368 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 A0A087WV62 115 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 PLRG1O43660 514 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 BRINP1O60477 761 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 CRTAPO75718 401 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 MVDP53602 400 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 LSM11P83369 360 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 KIAA0895LQ68EN5 471 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 SFTPA1Q8IWL2 248 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 MORN4Q8NDC4 146 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 NXF2Q9GZY0 626 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 CA14Q9ULX7 337 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 CFIP05156 583 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 HTR2CP28335 458 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 PXNP49023 591 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 TMEM240Q5SV17 173 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 FAAP20Q6NZ36 180 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 BAHD1Q8TBE0 780 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 NPRL2Q8WTW4 380 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 HOXB13Q92826 284 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 HIST1H2AAQ96QV6 131 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 MIXL1Q9H2W2 232 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 PDCD11Q14690 1871 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 TEX51A0A1B0GUA7 166 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 HCRTR1O43613 425 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 VAMP2P63027 116 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 MRPS21P82921 87 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 SGCBQ16585 318 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 TCEAL6Q6IPX3 200 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 SYS1Q8N2H4 156 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 TMEM185AQ8NFB2 350 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 OR5L2Q8NGL0 311 aa15.72■□□□□ 0.11
SMARCA4-215ENST00000590574 MYO7AQ13402 2215 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 TP53I11O14683 189 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 ZNF217O75362 1048 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 RAF1P04049 648 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 BCORP1Q8N888 145 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 RSC1A1Q92681 617 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 CPNE2Q96FN4 548 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 OPN1LWP04000 364 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 SMAD2Q15796 467 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 PLPP7Q8NBV4 271 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 NT5CQ8TCD5 201 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 MAN2C1Q9NTJ4 1040 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 SCGNO76038 276 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 KLK3P07288 261 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 RAD52P43351 418 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 EEF1A1P5Q5VTE0 462 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 EID2Q8N6I1 236 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 ZNF578Q96N58 590 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 HRASLSQ9HDD0 168 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 DOCK3Q8IZD9 2030 aa15.71■□□□□ 0.11
SMARCA4-215ENST00000590574 OR5K3A6NET4 321 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 AIPO00170 330 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 EPXP11678 715 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 POU3F4P49335 361 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 POU3F1Q03052 451 aaPredicted RBP15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 MELKQ14680 651 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 UBE3DQ7Z6J8 389 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 IQCF2Q8IXL9 164 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 GCDHQ92947 438 aaPredicted RBP15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 FAM3DQ96BQ1 224 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 UPRTQ96BW1 309 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 COX14Q96I36 57 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 SORCS2Q96PQ0 1159 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 CDC6Q99741 560 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 EMC3Q9P0I2 261 aa15.71■□□□□ 0.1
SMARCA4-215ENST00000590574 TPMTP51580 245 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 YOD1Q5VVQ6 348 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 OR2L13Q8N349 312 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 LCORQ96JN0 433 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 WDR90Q96KV7 1748 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 TRAV36DV7A0A075B6V5 113 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 PRKNO60260 465 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 FARS2O95363 451 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 GLP1RP43220 463 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 CSNK2A1P68400 391 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF79Q15937 498 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 STEAP1BQ6NZ63 245 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 CSNK2A3Q8NEV1 391 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 OR51T1Q8NGJ9 327 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 OR5D14Q8NGL3 314 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 RBPMSQ93062 196 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms