RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 LINGO2Q7L985 606 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 HIPK1Q86Z02 1210 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 ARMC8Q8IUR7 673 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 CCDC36Q8IYA8 594 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 ZNF525Q8N782 197 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 SMYD1Q8NB12 490 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 ADPRHL1Q8NDY3 354 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 PIK3C3Q8NEB9 887 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 ZNF417Q8TAU3 575 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 TAAR8Q969N4 342 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 FBXO17Q96EF6 278 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 LRRC37BQ96QE4 947 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 ZNF587Q96SQ5 575 aaPredicted RBP12.51□□□□□ -0.41
MBD1-220ENST00000589758 RSPO3Q9BXY4 272 aaPredicted RBP12.51□□□□□ -0.41
MBD1-220ENST00000589758 B3GAT1Q9P2W7 334 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 FBXO9Q9UK97 447 aaPredicted RBP12.51□□□□□ -0.41
MBD1-220ENST00000589758 CORINQ9Y5Q5 1042 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 FKBP7Q9Y680 259 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 PLCE1Q9P212 2302 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 TLN2Q9Y4G6 2542 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 FBN3Q75N90 2809 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 VSTM5A8MXK1 200 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 M0QX08 132 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 SHOX2O60902 331 aaPredicted RBP12.5□□□□□ -0.41
MBD1-220ENST00000589758 IFNA2P01563 188 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 IGKV3-15P01624 115 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 IGLV1-44P01699 117 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 NQO1P15559 274 aaKnown RBP12.5□□□□□ -0.41
MBD1-220ENST00000589758 PRDX6P30041 224 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 GRPRP30550 384 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 PCGF2P35227 344 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 SERPINF1P36955 418 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 RGS8P57771 180 aaPredicted RBP12.5□□□□□ -0.41
MBD1-220ENST00000589758 SNRPD2P62316 118 aaKnown RBP12.5□□□□□ -0.41
MBD1-220ENST00000589758 IL1RL1Q01638 556 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 NAAAQ02083 359 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 OR1Q1Q15612 314 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 MST1LQ2TV78 715 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 TMEM249Q2WGJ8 235 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 COMTD1Q86VU5 262 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 RANBP3LQ86VV4 465 aaPredicted RBP12.5□□□□□ -0.41
MBD1-220ENST00000589758 CALHM3Q86XJ0 350 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 UEVLDQ8IX04 471 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 OR4F15Q8NGB8 312 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 RNF217Q8TC41 542 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 C10orf105Q8TEF2 133 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 HTRA1Q92743 480 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 ZNF583Q96ND8 569 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 MDFIQ99750 246 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 NELFAQ9H3P2 528 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 CA10Q9NS85 328 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 ARL8BQ9NVJ2 186 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 CMTM6Q9NX76 183 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 GMPR2Q9P2T1 348 aaKnown RBP12.5□□□□□ -0.41
MBD1-220ENST00000589758 SEC14L4Q9UDX3 406 aa12.5□□□□□ -0.41
MBD1-220ENST00000589758 IGKV1D-42A0A075B6H8 117 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 A0A096LPE4 126 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 A0A1W2PPZ6 126 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 B9A039 149 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 GPRIN2O60269 458 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 MFN2O95140 757 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 CECR9P0C854 216 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 CBR1P16152 277 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 ARR3P36575 388 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 PCBP3P57721 371 aaKnown RBP12.49□□□□□ -0.41
MBD1-220ENST00000589758 ARF1P84077 181 aaKnown RBP12.49□□□□□ -0.41
MBD1-220ENST00000589758 VLDLRP98155 873 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 EFNB3Q15768 340 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 C6orf52Q5T4I8 152 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 SWT1Q5T5J6 900 aaKnown RBP12.49□□□□□ -0.41
MBD1-220ENST00000589758 INTS11Q5TA45 600 aaKnown RBP12.49□□□□□ -0.41
MBD1-220ENST00000589758 PODNL1Q6PEZ8 512 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 ARPINQ7Z6K5 226 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 PATL1Q86TB9 770 aaKnown RBP12.49□□□□□ -0.41
MBD1-220ENST00000589758 SLC30A8Q8IWU4 369 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 SLC15A3Q8IY34 581 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 SCAIQ8N9R8 606 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 CCDC197Q8NCU1 140 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 SLC26A7Q8TE54 656 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 SLC41A3Q96GZ6 507 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 OR2M2Q96R28 347 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 PRR14Q9BWN1 585 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 ASPNQ9BXN1 380 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 GPR35Q9HC97 309 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 MYOZ1Q9NP98 299 aaPredicted RBP12.49□□□□□ -0.41
MBD1-220ENST00000589758 ABCA1O95477 2261 aa12.49□□□□□ -0.41
MBD1-220ENST00000589758 A0A0B4J2E0 115 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 A0A1B0GX12 115 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 FAM220BPB1ANY3 271 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 MS4A18H0YCH9 400 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 NDUFS8O00217 210 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 USF1P22415 310 aaPredicted RBP12.48□□□□□ -0.41
MBD1-220ENST00000589758 CBLP22681 906 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 PDLIM4P50479 330 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 SLC7A2P52569 658 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 PSME3P61289 254 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 TUBA1BP68363 451 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 TUBA4AP68366 448 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 LIPEQ05469 1076 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 ADIPOQQ15848 244 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms