RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 ABCA2Q9BZC7 2435 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 SETXQ7Z333 2677 aaKnown RBP2.32□□□□□ -2.04
SMAD4-207ENST00000589076 MTCL1Q9Y4B5 1905 aaKnown RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 RBMY1BA6NDE4 496 aaKnown RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 RBMY1EA6NEQ0 496 aaKnown RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 CCDC169A6NNP5 214 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 C12orf77C9JDV5 145 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 PANO1I0J062 215 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 SLC31A2O15432 143 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 ZNF861PO60384 105 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 ERLIN2O94905 339 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 IGHV2-5P01817 119 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 PRB2P02812 416 aaPredicted RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 C2P06681 752 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 GIPP09681 153 aaPredicted RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 RBMY1DP0C7P1 496 aaKnown RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 UBTFL1P0CB47 393 aaPredicted RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 RBMY1A1P0DJD3 496 aaKnown RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 TDGF1P13385 188 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 CRISP2P16562 243 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 TCN1P20061 433 aaPredicted RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 SLC2A5P22732 501 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 PBLDP30039 288 aaPredicted RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 IFNA8P32881 189 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 TPMTP51580 245 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 TDGF1P3P51864 188 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 SH3BGRP55822 239 aaPredicted RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 CKAP4Q07065 602 aaKnown RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 BST2Q10589 180 aaKnown RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 PPIL2Q13356 520 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 GPNMBQ14956 572 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 ARHGAP19Q14CB8 494 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 CYTH1Q15438 398 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 MPPED2Q15777 294 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 CTRB2Q6GPI1 263 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 C6orf89Q6UWU4 347 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 PP632Q6XCG6 107 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 SLC25A48Q6ZT89 311 aaKnown RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 CDR2LQ86X02 465 aaPredicted RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 PSTKQ8IV42 348 aaKnown RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 FAM71E2Q8N5Q1 922 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 VN1R2Q8NFZ6 395 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 OR2L3Q8NG85 312 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 OR4F6Q8NGB9 312 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 OR10G9Q8NGN4 311 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 OR1N2Q8NGR9 330 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 OR6X1Q8NH79 312 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 FANK1Q8TC84 345 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 SMARCD2Q92925 531 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 PLEKHA8Q96JA3 519 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 MS4A4EQ96PG1 132 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 MYCBPQ99417 103 aaPredicted RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 SORT1Q99523 831 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 METTL7AQ9H8H3 244 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 EML4Q9HC35 981 aaKnown RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 KLHL28Q9NXS3 571 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 SLC2A8Q9NY64 477 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 CALYQ9NYX4 217 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 SLC7A8Q9UHI5 535 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 NUFIP1Q9UHK0 495 aaKnown RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 ZNF225Q9UK10 706 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 RRP15Q9Y3B9 282 aaKnown RBP2.31□□□□□ -2.04
SMAD4-207ENST00000589076 CACNG2Q9Y698 323 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 CDHR2Q9BYE9 1310 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 PDS5BQ9NTI5 1447 aa2.31□□□□□ -2.04
SMAD4-207ENST00000589076 A0A0G2JLM5 398 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 A0A1W2PPV9 198 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 TRIM64CA6NLI5 447 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 DYNC1I1O14576 645 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 TMEM50AO95807 157 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 INSP01308 110 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 GAPDHP04406 335 aaKnown RBP2.3□□□□□ -2.04
SMAD4-207ENST00000589076 MGMTP16455 207 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 ZNF17P17021 662 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 KITLGP21583 273 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 UGT2B15P54855 530 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 FBXW4P57775 412 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 PLP1P60201 277 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 KIAA0087Q14695 138 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 LRRC10Q5BKY1 277 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 KHDRBS2Q5VWX1 349 aaKnown RBP2.3□□□□□ -2.04
SMAD4-207ENST00000589076 FRMPD2BQ6IN97 320 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 TRIM40Q6P9F5 258 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 SLC22A9Q8IVM8 553 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 MKXQ8IYA7 352 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 CEP112Q8N8E3 955 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 MCOLN3Q8TDD5 553 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 BLOC1S5Q8TDH9 187 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 HSFY1Q96LI6 401 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 C12orf42Q96LP6 360 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 OR8B4Q96RC9 309 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 PLIN2Q99541 437 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 SH3GL1Q99961 368 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 KCTD14Q9BQ13 255 aaPredicted RBP2.3□□□□□ -2.04
SMAD4-207ENST00000589076 HES7Q9BYE0 225 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 SRMSQ9H3Y6 488 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 ADAP2Q9NPF8 381 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 SPATA7Q9P0W8 599 aa2.3□□□□□ -2.04
SMAD4-207ENST00000589076 TET2Q6N021 2002 aaPredicted RBP2.3□□□□□ -2.04
SMAD4-207ENST00000589076 USP9XQ93008 2570 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms