RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 DNAJA4Q8WW22 397 aaPredicted RBP16.72■□□□□ 0.27
TRAF4-216ENST00000586813 SNX18Q96RF0 628 aa16.72■□□□□ 0.27
TRAF4-216ENST00000586813 SLC25A37Q9NYZ2 338 aa16.72■□□□□ 0.27
TRAF4-216ENST00000586813 HPRP00739 348 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 HLA-HP01893 362 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 ARAFP10398 606 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 HLA-DOBP13765 273 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 NQO1P15559 274 aaKnown RBP16.71■□□□□ 0.27
TRAF4-216ENST00000586813 APEX1P27695 318 aaKnown RBP16.71■□□□□ 0.27
TRAF4-216ENST00000586813 GCNT6Q5T4J0 391 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 CARD17Q5XLA6 110 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 FAM91A1Q658Y4 838 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 ULK3Q6PHR2 472 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 DHRS4L2Q6PKH6 230 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 MSRB3Q8IXL7 192 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 C20orf196Q8IYI0 205 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 C10orf111Q8N326 155 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 UBASH3BQ8TF42 649 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 HPS1Q92902 700 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 SLC41A3Q96GZ6 507 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 B3GNT2Q9NY97 397 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 NKIRAS1Q9NYS0 192 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 TESQ9UGI8 421 aaKnown RBP16.71■□□□□ 0.27
TRAF4-216ENST00000586813 CORINQ9Y5Q5 1042 aa16.71■□□□□ 0.27
TRAF4-216ENST00000586813 A0A087WUJ7 227 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 MS4A18H0YCH9 400 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 ADRA2AP08913 450 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 NCALDP61601 193 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 POU3F1Q03052 451 aaPredicted RBP16.7■□□□□ 0.26
TRAF4-216ENST00000586813 RIN1Q13671 783 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 MFSD13AQ14CX5 517 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 TRIP10Q15642 601 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 GSG1Q2KHT4 349 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 MS4A18Q3C1V0 323 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 GLIPR1L2Q4G1C9 344 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 LRIF1Q5T3J3 769 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 KRT73Q86Y46 540 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 SCAIQ8N9R8 606 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 LINC01356Q8N9X3 169 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 OR6S1Q8NH40 331 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 SLC47A1Q96FL8 570 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 MS4A3Q96HJ5 214 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 EMC6Q9BV81 110 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 SPATA5L1Q9BVQ7 753 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 TPK1Q9H3S4 243 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 CMAHPQ9Y471 501 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 USH1CQ9Y6N9 552 aa16.7■□□□□ 0.26
TRAF4-216ENST00000586813 HAX1O00165 279 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 TPST1O60507 370 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 IFNGR1P15260 489 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 ZNF14P17017 642 aaPredicted RBP16.69■□□□□ 0.26
TRAF4-216ENST00000586813 NR4A1P22736 598 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 MRPL19P49406 292 aaKnown RBP16.69■□□□□ 0.26
TRAF4-216ENST00000586813 CDH15P55291 814 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 STX1BP61266 288 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 MAGOHP61326 146 aaKnown RBP16.69■□□□□ 0.26
TRAF4-216ENST00000586813 CDK6Q00534 326 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 MSMPQ1L6U9 139 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 LIPNQ5VXI9 398 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 REEP3Q6NUK4 255 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 EPGNQ6UW88 154 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 ZNF813Q6ZN06 617 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 ZNF627Q7L945 461 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 RNF217Q8TC41 542 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 LRR1Q96L50 414 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 ZNF75AQ96N20 296 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 EPYCQ99645 322 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 ASPNQ9BXN1 380 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 MRPL37Q9BZE1 423 aaKnown RBP16.69■□□□□ 0.26
TRAF4-216ENST00000586813 B3GAT2Q9NPZ5 323 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 MED29Q9NX70 200 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 SELENONQ9NZV5 590 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 SLAMF8Q9P0V8 285 aa16.69■□□□□ 0.26
TRAF4-216ENST00000586813 NBEAL1Q6ZS30 2694 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 A0A0B4J2E0 115 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 A0A1B0GX12 115 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 BGLAPP02818 100 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 CD79AP11912 226 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 B4GALT1P15291 398 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 EVX1P49640 407 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 RGS8P57771 180 aaPredicted RBP16.68■□□□□ 0.26
TRAF4-216ENST00000586813 PIGFQ07326 219 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 PUDPQ08623 228 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 FUNDC1Q8IVP5 155 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 WDFY1Q8IWB7 410 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 RFLNBQ8N5W9 214 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 MRPL24Q96A35 216 aaKnown RBP16.68■□□□□ 0.26
TRAF4-216ENST00000586813 MOGAT1Q96PD6 335 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 MRPL39Q9NYK5 338 aaKnown RBP16.68■□□□□ 0.26
TRAF4-216ENST00000586813 VAPAQ9P0L0 249 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 TMEFF2Q9UIK5 374 aaPredicted RBP16.68■□□□□ 0.26
TRAF4-216ENST00000586813 NOX1Q9Y5S8 564 aa16.68■□□□□ 0.26
TRAF4-216ENST00000586813 LYNX1G3V0Z9 82 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 M0R233 179 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 SYNGR3O43761 229 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 LYNX1P0DP58 116 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 ZNF35P13682 527 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 PPIBP23284 216 aaKnown RBP16.67■□□□□ 0.26
TRAF4-216ENST00000586813 PMS2P3Q13401 168 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 CAMK2DQ13557 499 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms