RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SLC43A1O75387 559 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 ZNF432O94892 652 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 POU2F1P14859 743 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 FASP25445 335 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 GSSP48637 474 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 DAP3P51398 398 aaKnown RBP16.95■□□□□ 0.3
DDX39A-204ENST00000586558 TSPAN31Q12999 210 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 FHL1Q13642 323 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 ATP6AP1Q15904 470 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 NIPAL3Q6P499 406 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 SLC35D2Q76EJ3 337 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 GABRG1Q8N1C3 465 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 OR51A7Q8NH64 312 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 MOSPD2Q8NHP6 518 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 OR2M2Q96R28 347 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 TNFRSF13CQ96RJ3 184 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 STX18Q9P2W9 335 aaKnown RBP16.95■□□□□ 0.3
DDX39A-204ENST00000586558 SIGLEC7Q9Y286 467 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 CACNA1CQ13936 2221 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 COL12A1Q99715 3063 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 ZNF726A6NNF4 738 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 SERPINI2O75830 405 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 IFNGR1P15260 489 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 EDNRAP25101 427 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 SELENOPP49908 381 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 ARHGDIAP52565 204 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 LAPTM4AQ15012 233 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 ABHD12BQ7Z5M8 362 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-204ENST00000586558 TMEM123Q8N131 208 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 UBE2J2Q8N2K1 259 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 ACBD4Q8NC06 268 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 OR9Q2Q8NGE9 314 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 OR6X1Q8NH79 312 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 GIPC3Q8TF64 312 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 NRBF2Q96F24 287 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 GPA33Q99795 319 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 BDH2Q9BUT1 245 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 DGCR6LQ9BY27 220 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 LINC00470Q9BZP3 86 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 SLC24A3Q9HC58 644 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 MCCC2Q9HCC0 563 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 ASB6Q9NWX5 421 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 MED29Q9NX70 200 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 PLEKHB1Q9UF11 243 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-204ENST00000586558 PRSS50Q9UI38 385 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 MGAT4BQ9UQ53 548 aa16.94■□□□□ 0.3
DDX39A-204ENST00000586558 SETXQ7Z333 2677 aaKnown RBP16.93■□□□□ 0.3
DDX39A-204ENST00000586558 MCIDASD6RGH6 385 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 PTP4A3O75365 173 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 NDUFB2O95178 105 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 BCL10O95999 233 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 ADAP00813 363 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 F13BP05160 661 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 IGFBP2P18065 325 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 PSMB1P20618 241 aaKnown RBP16.93■□□□□ 0.3
DDX39A-204ENST00000586558 IST1P53990 364 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 PPP1R8Q12972 351 aaKnown RBP16.93■□□□□ 0.3
DDX39A-204ENST00000586558 TSPO2Q5TGU0 170 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 FAM205BPQ63HN1 556 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.93■□□□□ 0.3
DDX39A-204ENST00000586558 AQP11Q8NBQ7 271 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 OR10G2Q8NGC3 310 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 PYDC1Q8WXC3 89 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 LRR1Q96L50 414 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 HDHD5Q9BXW7 423 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 ENKD1Q9H0I2 346 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 TXNIPQ9H3M7 391 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 NTN4Q9HB63 628 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 SLC7A10Q9NS82 523 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 UPB1Q9UBR1 384 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 ASH1LQ9NR48 2969 aaKnown RBP16.93■□□□□ 0.3
DDX39A-204ENST00000586558 DOPEY2Q9Y3R5 2298 aa16.93■□□□□ 0.3
DDX39A-204ENST00000586558 SLC35F4A4IF30 521 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 C16orf97H3BN30 126 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 KRT33AO76009 404 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 IGHMP01871 453 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 COX5AP20674 150 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 GSTM3P21266 225 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 GRNP28799 593 aaKnown RBP16.92■□□□□ 0.3
DDX39A-204ENST00000586558 UGT2B10P36537 528 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 RPL4P36578 427 aaKnown RBP16.92■□□□□ 0.3
DDX39A-204ENST00000586558 BIDP55957 195 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 ACKR1Q16570 336 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 RPL13AP3Q6NVV1 102 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 SHQ1Q6PI26 577 aaKnown RBP16.92■□□□□ 0.3
DDX39A-204ENST00000586558 SMARCD3Q6STE5 483 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 STAC2Q6ZMT1 411 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 LRRC75AQ8NAA5 344 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 FANK1Q8TC84 345 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 SLC25A44Q96H78 314 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-204ENST00000586558 TXNDC15Q96J42 360 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 GPX7Q96SL4 187 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-204ENST00000586558 SPOCK3Q9BQ16 436 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 USB1Q9BQ65 265 aaKnown RBP16.92■□□□□ 0.3
DDX39A-204ENST00000586558 OR10A4Q9H209 315 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 GPR52Q9Y2T5 361 aa16.92■□□□□ 0.3
DDX39A-204ENST00000586558 CENPBD1B2RD01 187 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 ZNF587BE7ETH6 402 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 C19orf84I3L1E1 186 aa16.91■□□□□ 0.3
DDX39A-204ENST00000586558 ENTPD5O75356 428 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms