RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CCDC71Q8IV32 467 aaPredicted RBP12.1□□□□□ -0.47
VMP1-203ENST00000586245 CLDN22Q8N7P3 220 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 TMEM45BQ96B21 275 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 SAMD8Q96LT4 415 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 ZNF385AQ96PM9 386 aaKnown RBP12.1□□□□□ -0.47
VMP1-203ENST00000586245 POLDIP3Q9BY77 421 aaKnown RBP12.1□□□□□ -0.47
VMP1-203ENST00000586245 EGLN3Q9H6Z9 239 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 C12orf49Q9H741 205 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 SMURF2Q9HAU4 748 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 RNPEPL1Q9HAU8 725 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 PAPOLBQ9NRJ5 636 aaKnown RBP12.1□□□□□ -0.47
VMP1-203ENST00000586245 TBC1D23Q9NUY8 699 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 PROCRQ9UNN8 238 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 ARHGAP21Q5T5U3 1957 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 NPIPB13A6NJU9 1138 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 ZNF726A6NNF4 738 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 NPIPB4C9JG80 1138 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 EI24O14681 340 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 MGRN1O60291 552 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 TNFSF13O75888 250 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 SMNDC1O75940 238 aaKnown RBP eCLIP12.09□□□□□ -0.47
VMP1-203ENST00000586245 SOX14O95416 240 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 CD14P08571 375 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 OSMP13725 252 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 IFNGR1P15260 489 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 BMP5P22003 454 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 IGFBP5P24593 272 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 RPS6KA3P51812 740 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 SLC34A1Q06495 639 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 TOP3AQ13472 1001 aaPredicted RBP12.09□□□□□ -0.47
VMP1-203ENST00000586245 DAG1Q14118 895 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 MELKQ14680 651 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 ACKR1Q16570 336 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 ANKRD34AQ69YU3 496 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 KDM4DQ6B0I6 523 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 VWA1Q6PCB0 445 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 THSD4Q6ZMP0 1018 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 DPY19L2P2Q6ZN68 376 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 ZBTB49Q6ZSB9 765 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 KIF18BQ86Y91 864 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 ZNF100Q8IYN0 542 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 CBR4Q8N4T8 237 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 ZIC4Q8N9L1 334 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 LRRC75AQ8NAA5 344 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 TEX47Q8TBZ9 253 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 STARD4Q96DR4 205 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 ADAD1Q96M93 576 aaKnown RBP12.09□□□□□ -0.47
VMP1-203ENST00000586245 GPX7Q96SL4 187 aaPredicted RBP12.09□□□□□ -0.47
VMP1-203ENST00000586245 KATNB1Q9BVA0 655 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 IFT27Q9BW83 186 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 TXNIPQ9H3M7 391 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 PIGMQ9H3S5 423 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 MED29Q9NX70 200 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 IL20Q9NYY1 176 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 IL20RAQ9UHF4 553 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 ENOPH1Q9UHY7 261 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 RCE1Q9Y256 329 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 ORC6Q9Y5N6 252 aa12.09□□□□□ -0.47
VMP1-203ENST00000586245 SLC35F4A4IF30 521 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 OR6C65A6NJZ3 312 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 EEF1E1-BLOC1S5C9J1V9 151 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 EEF1E1O43324 174 aaKnown RBP12.08□□□□□ -0.48
VMP1-203ENST00000586245 SLC43A1O75387 559 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 AGFG2O95081 481 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 IGHMP01871 453 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 CD8BP10966 210 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 ZNF26P17031 533 aaPredicted RBP12.08□□□□□ -0.48
VMP1-203ENST00000586245 CDH2P19022 906 aaPredicted RBP12.08□□□□□ -0.48
VMP1-203ENST00000586245 POU1F1P28069 291 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 ALDH3A2P51648 485 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 BIDP55957 195 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 FXYD6P3P58550 94 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 RPL27P61353 136 aaKnown RBP12.08□□□□□ -0.48
VMP1-203ENST00000586245 ERVK-25P63136 954 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 PPP2R2BQ00005 443 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 RIPK1Q13546 671 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 FAM205BPQ63HN1 556 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 BTLAQ7Z6A9 289 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 PARP8Q8N3A8 854 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 OR6X1Q8NH79 312 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 MAGEE2Q8TD90 523 aaPredicted RBP12.08□□□□□ -0.48
VMP1-203ENST00000586245 APH1AQ96BI3 265 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 TXNDC15Q96J42 360 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 EMC6Q9BV81 110 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 TSSK6Q9BXA6 273 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 NRIP3Q9NQ35 241 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 PLSCR4Q9NRQ2 329 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 USE1Q9NZ43 259 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 GRHPRQ9UBQ7 328 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 REV1Q9UBZ9 1251 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 NKX1-2Q9UD57 310 aaPredicted RBP12.08□□□□□ -0.48
VMP1-203ENST00000586245 ZNF346Q9UL40 294 aaKnown RBP12.08□□□□□ -0.48
VMP1-203ENST00000586245 DOCK7Q96N67 2140 aa12.08□□□□□ -0.48
VMP1-203ENST00000586245 A6NIZ1 184 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 SOCS2O14508 198 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 ZG16O60844 167 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 KRT33AO76009 404 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 ATP6V1G2O95670 118 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 PPP1R3DO95685 299 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 APEHP13798 732 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms