RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ZNF468Q5VIY5 522 aaPredicted RBP5.57□□□□□ -1.52
LIG3-206ENST00000586058 HBMQ6B0K9 141 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 BORAQ6PGQ7 559 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 PAQR6Q6TCH4 344 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 TMPPEQ6ZT21 453 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 SLC35D2Q76EJ3 337 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 PXKQ7Z7A4 578 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 P2RY8Q86VZ1 359 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 CLVS1Q8IUQ0 354 aaPredicted RBP5.57□□□□□ -1.52
LIG3-206ENST00000586058 SULF2Q8IWU5 870 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 MCEMP1Q8IX19 187 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 MDS2Q8NDY4 140 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 FAM83FQ8NEG4 500 aaPredicted RBP5.57□□□□□ -1.52
LIG3-206ENST00000586058 OR10H4Q8NGA5 316 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 OR10H5Q8NGA6 315 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 OR51G2Q8NGK0 314 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 HAVCR2Q8TDQ0 301 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 RAB2BQ8WUD1 216 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 HAS2Q92819 552 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 GGHQ92820 318 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 MIB2Q96AX9 1013 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 RASD2Q96D21 266 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 DNAJA3Q96EY1 480 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 SIGLEC12Q96PQ1 595 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 TSPAN32Q96QS1 320 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 NMNAT3Q96T66 252 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 MNTQ99583 582 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 BCL7BQ9BQE9 202 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 PTDSS2Q9BVG9 487 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 CDCA4Q9BXL8 241 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 PRRG4Q9BZD6 226 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 RERGLQ9H628 205 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 ACOT13Q9NPJ3 140 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 B3GAT2Q9NPZ5 323 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 TRIM36Q9NQ86 728 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 RPRD1BQ9NQG5 326 aaKnown RBP5.57□□□□□ -1.52
LIG3-206ENST00000586058 PLA2G3Q9NZ20 509 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 EMC3Q9P0I2 261 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 AASSQ9UDR5 926 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 MCTS1Q9ULC4 181 aaKnown RBP5.57□□□□□ -1.52
LIG3-206ENST00000586058 POLR1DQ9Y2S0 133 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 ADAM18Q9Y3Q7 739 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 TMEM14AQ9Y6G1 99 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 MED13Q9UHV7 2174 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 WDFY4Q6ZS81 3184 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 WDR87Q6ZQQ6 2873 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 A0A1W2PNR3 127 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 TMEM129A0AVI4 362 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 LRRC3CA6NJW4 275 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 AQP7P3A6NL99 342 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 TRIM64CA6NLI5 447 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 CENPBD1B2RD01 187 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 FTCDNL1E5RQL4 147 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 ZNF701M0R085 212 aaPredicted RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 CCRL2O00421 344 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 PLPP3O14495 311 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 TNFSF11O14788 317 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 TMCC2O75069 709 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 GLCEO94923 617 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 SLC2A10O95528 541 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 TXNDC12O95881 172 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 ACTL6AO96019 429 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 TFAP2AP05549 437 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 HPNP05981 417 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 STSP08842 583 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 FCGR2AP12318 317 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 ZNF823P16415 610 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 SPI1P17947 270 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 LORP23490 312 aaPredicted RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 EIF2S3P41091 472 aaKnown RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 EIF1AXP47813 144 aaKnown RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 ID4P47928 161 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 ALDH3B2P48448 385 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 SERPINB10P48595 397 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 TNFSF10P50591 281 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 SLC25A1P53007 311 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 FXYD6P3P58550 94 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 PPIAP62937 165 aaKnown RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 HSF2Q03933 536 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 EMX1Q04741 257 aaPredicted RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 MRPL28Q13084 256 aaKnown RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 MELKQ14680 651 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 SLC10A1Q14973 349 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 SF3B4Q15427 424 aaKnown RBP eCLIP5.56□□□□□ -1.522e-10■■■■■ 37.5
LIG3-206ENST00000586058 INPP5JQ15735 1006 aaPredicted RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 INAQ16352 499 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 ACKR1Q16570 336 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 LINC01559Q495D7 138 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 WIPI1Q5MNZ9 446 aaPredicted RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 EEF1A1P5Q5VTE0 462 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 AADACL4Q5VUY2 407 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 UBE2UQ5VVX9 321 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 YRDCQ86U90 279 aaKnown RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 PM20D2Q8IYS1 436 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 ACBD7Q8N6N7 88 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 ARIH2OSQ8N7S6 290 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 CYB561A3Q8NBI2 242 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 NOXO1Q8NFA2 376 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 FDCSPQ8NFU4 85 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 OR52I1Q8NGK6 324 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms