RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 OR2M5A3KFT3 312 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 A6NIZ1 184 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 CENPBD1B2RD01 187 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 TRAPPC6AO75865 159 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 AGFG2O95081 481 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 DCKP27707 260 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 HTR1FP30939 366 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 SDHAP31040 664 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 RPL4P36578 427 aaKnown RBP11.33□□□□□ -0.6
VMP1-202ENST00000585847 CLDN15P56746 228 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 RAP1BP61224 184 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 RAP1AP62834 184 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 LSM11P83369 360 aaKnown RBP eCLIP11.33□□□□□ -0.6
VMP1-202ENST00000585847 TBCEQ15813 527 aaPredicted RBP11.33□□□□□ -0.6
VMP1-202ENST00000585847 SLC35D3Q5M8T2 416 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 RAET1LQ5VY80 246 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 H1FNTQ75WM6 255 aaPredicted RBP11.33□□□□□ -0.6
VMP1-202ENST00000585847 TCEANCQ8N8B7 351 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 BPIFB6Q8NFQ5 453 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 OR51A7Q8NH64 312 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 CNIH3Q8TBE1 160 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 TAAR8Q969N4 342 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 COPS4Q9BT78 406 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 JAM3Q9BX67 310 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 TIGARQ9NQ88 270 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 HAO2Q9NYQ3 351 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 TNFRSF10DQ9UBN6 386 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 PCDHGB5Q9Y5G0 923 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 NOX1Q9Y5S8 564 aa11.33□□□□□ -0.6
VMP1-202ENST00000585847 TRAV27A0A087WT01 109 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 TRGV5A0A0B4J1U4 118 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 A0A1W2PRG6 482 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 LIPT2A6NK58 231 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 PRR23D1E9PI22 279 aaPredicted RBP11.32□□□□□ -0.6
VMP1-202ENST00000585847 AQP7O14520 342 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 TLX2O43763 284 aaPredicted RBP11.32□□□□□ -0.6
VMP1-202ENST00000585847 AKAP8O43823 692 aaKnown RBP11.32□□□□□ -0.6
VMP1-202ENST00000585847 FADS2O95864 444 aaKnown RBP11.32□□□□□ -0.6
VMP1-202ENST00000585847 SMIM18P0DKX4 95 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 PRR23D2P0DMB1 279 aaPredicted RBP11.32□□□□□ -0.6
VMP1-202ENST00000585847 EDN3P14138 238 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 JUNBP17275 347 aaPredicted RBP11.32□□□□□ -0.6
VMP1-202ENST00000585847 SHC1P29353 583 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 SLC15A1P46059 708 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 RPS5P46782 204 aaKnown RBP11.32□□□□□ -0.6
VMP1-202ENST00000585847 SLC25A1P53007 311 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 FXYD6P3P58550 94 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 PUDPQ08623 228 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 FOXD4Q12950 439 aaPredicted RBP11.32□□□□□ -0.6
VMP1-202ENST00000585847 PMS2P3Q13401 168 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 TOMM20Q15388 145 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 BCL2A1Q16548 175 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 KRTCAP3Q53RY4 240 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 CLEC12AQ5QGZ9 265 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 AADACL4Q5VUY2 407 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 ACSM5Q6NUN0 579 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 DNM1P34Q6PK57 102 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 PAQR6Q6TCH4 344 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 PXKQ7Z7A4 578 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 CCDC103Q8IW40 242 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 POMGNT2Q8NAT1 580 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 ST6GALNAC3Q8NDV1 305 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 OR4Q3Q8NH05 313 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 OR14L1PQ8NHC6 308 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 HAVCR2Q8TDQ0 301 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 MRPL48Q96GC5 212 aaKnown RBP11.32□□□□□ -0.6
VMP1-202ENST00000585847 TNFRSF13CQ96RJ3 184 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 NAA11Q9BSU3 229 aaPredicted RBP11.32□□□□□ -0.6
VMP1-202ENST00000585847 CDCA4Q9BXL8 241 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 CHST11Q9NPF2 352 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 INIPQ9NRY2 104 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 GRHPRQ9UBQ7 328 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 MOKQ9UQ07 419 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 RASD1Q9Y272 281 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 ZNF835Q9Y2P0 537 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 SPTAN1Q13813 2472 aaKnown RBP11.32□□□□□ -0.6
VMP1-202ENST00000585847 MYO9AB2RTY4 2548 aa11.32□□□□□ -0.6
VMP1-202ENST00000585847 USP9XQ93008 2570 aaPredicted RBP11.31□□□□□ -0.6
VMP1-202ENST00000585847 ZNF701M0R085 212 aaPredicted RBP11.31□□□□□ -0.6
VMP1-202ENST00000585847 XKRYO14609 159 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 PRKYO43930 277 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 CDK1P06493 297 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 TFPIP10646 304 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 ACVR2AP27037 513 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 GRPRP30550 384 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 MTNR1AP48039 350 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 STARP49675 285 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 LHX2P50458 406 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 CDH11P55287 796 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 ACTC1P68032 377 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 ACTA1P68133 377 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 ZNF91Q05481 1191 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 RPL18Q07020 188 aaKnown RBP11.31□□□□□ -0.6
VMP1-202ENST00000585847 FHL1Q13642 323 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 POU4F3Q15319 338 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 TMEM236Q5W0B7 351 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 VASNQ6EMK4 673 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 LAIR2Q6ISS4 152 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 TMPPEQ6ZT21 453 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 ESPNLQ6ZVH7 1005 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms