RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 EGLN3Q9H6Z9 239 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 BCO1Q9HAY6 547 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 B3GAT2Q9NPZ5 323 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 CLCF1Q9UBD9 225 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 MBD3L4A6NDZ8 208 aaPredicted RBP11.54□□□□□ -0.56
TRIM47-202ENST00000585333 MBD3L3A6NE82 208 aaPredicted RBP11.54□□□□□ -0.56
TRIM47-202ENST00000585333 MBD3L5A6NJ08 208 aaPredicted RBP11.54□□□□□ -0.56
TRIM47-202ENST00000585333 MS4A18H0YCH9 400 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 BHLHE40O14503 412 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 IGHG1P01857 330 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 YES1P07947 543 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 TIMP3P35625 211 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 GGT2P36268 569 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 P2RY4P51582 365 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 BLVRAP53004 296 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 TEKQ02763 1124 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 LGALS3BPQ08380 585 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 SNAPC1Q16533 368 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 MS4A18Q3C1V0 323 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 CLEC12AQ5QGZ9 265 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 MEDAGQ5VYS4 303 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 KIF18BQ86Y91 864 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 C8orf59Q8N0T1 100 aaPredicted RBP11.54□□□□□ -0.56
TRIM47-202ENST00000585333 GALNT11Q8NCW6 608 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 OR5M9Q8NGP3 310 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 OR6X1Q8NH79 312 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 MBD3L2Q8NHZ7 208 aaPredicted RBP11.54□□□□□ -0.56
TRIM47-202ENST00000585333 FNDC9Q8TBE3 224 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 TFAP2CQ92754 450 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 RFKQ969G6 155 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 ZNF845Q96IR2 970 aaPredicted RBP11.54□□□□□ -0.56
TRIM47-202ENST00000585333 ALG12Q9BV10 488 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 CMC2Q9NRP2 79 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 PNPLA3Q9NST1 481 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 KLHL13Q9P2N7 655 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 NDRG4Q9ULP0 352 aaKnown RBP11.54□□□□□ -0.56
TRIM47-202ENST00000585333 MGAQ8IWI9 3026 aa11.54□□□□□ -0.56
TRIM47-202ENST00000585333 MPDZO75970 2070 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 TLN1Q9Y490 2541 aaKnown RBP11.53□□□□□ -0.56
TRIM47-202ENST00000585333 FREM3P0C091 2139 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 HSPB2A8KAH6 182 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 E9PLN8 166 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 H0YC42 278 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 MITFO75030 526 aaPredicted RBP11.53□□□□□ -0.56
TRIM47-202ENST00000585333 SLC43A1O75387 559 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 MRPL33O75394 65 aaKnown RBP11.53□□□□□ -0.56
TRIM47-202ENST00000585333 PPP1R3DO95685 299 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 F13BP05160 661 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 IFNGR1P15260 489 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 ACADSP16219 412 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 PCYT1AP49585 367 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 CSNK2BP67870 215 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 C19orf57Q0VDD7 668 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 KRR1Q13601 381 aaKnown RBP11.53□□□□□ -0.56
TRIM47-202ENST00000585333 FHL1Q13642 323 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 HSPB2Q16082 182 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 ACKR1Q16570 336 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 ZIK1Q3SY52 487 aaPredicted RBP11.53□□□□□ -0.56
TRIM47-202ENST00000585333 C12orf73Q69YU5 71 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 CREB3L2Q70SY1 520 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 MEX3DQ86XN8 651 aaKnown RBP11.53□□□□□ -0.56
TRIM47-202ENST00000585333 LRRC75AQ8NAA5 344 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 POMGNT2Q8NAT1 580 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 MOSPD2Q8NHP6 518 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 FAM81AQ8TBF8 368 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 ZNF566Q969W8 418 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 SLC25A44Q96H78 314 aaPredicted RBP11.53□□□□□ -0.56
TRIM47-202ENST00000585333 LRR1Q96L50 414 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 RBP7Q96R05 134 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 MBOAT4Q96T53 435 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 VKORC1Q9BQB6 163 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 ANKRD60Q9BZ19 345 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 ASB6Q9NWX5 421 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 H2AFY2Q9P0M6 372 aaPredicted RBP11.53□□□□□ -0.56
TRIM47-202ENST00000585333 NOSIPQ9Y314 301 aaKnown RBP11.53□□□□□ -0.56
TRIM47-202ENST00000585333 IER3IP1Q9Y5U9 82 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 DNAJC13O75165 2243 aa11.53□□□□□ -0.56
TRIM47-202ENST00000585333 ZNF407Q9C0G0 2248 aa11.52□□□□□ -0.56
TRIM47-202ENST00000585333 ZNF716A6NP11 495 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 B8ZZF3 427 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 TRAF3IP2O43734 574 aaPredicted RBP11.52□□□□□ -0.57
TRIM47-202ENST00000585333 SS18L1O75177 396 aaPredicted RBP11.52□□□□□ -0.57
TRIM47-202ENST00000585333 SERPINI2O75830 405 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 CNOT4O95628 575 aaKnown RBP11.52□□□□□ -0.57
TRIM47-202ENST00000585333 TP53P04637 393 aaPredicted RBP11.52□□□□□ -0.57
TRIM47-202ENST00000585333 CRABP1P29762 137 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 ACVR1BP36896 505 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 GUCA1AP43080 201 aaPredicted RBP11.52□□□□□ -0.57
TRIM47-202ENST00000585333 MLLT10P55197 1068 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 CLRN1P58418 232 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 FXYD6P3P58550 94 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 ERVK-25P63136 954 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 ADARB1P78563 741 aaKnown RBP11.52□□□□□ -0.57
TRIM47-202ENST00000585333 TMED1Q13445 227 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 TOP3AQ13472 1001 aaPredicted RBP11.52□□□□□ -0.57
TRIM47-202ENST00000585333 MED21Q13503 144 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 STK11Q15831 433 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 C3AR1Q16581 482 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 RIPPLY2Q5TAB7 128 aa11.52□□□□□ -0.57
TRIM47-202ENST00000585333 KRT80Q6KB66 452 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms