RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 TMEM99Q8N816 258 aa13.63□□□□□ -0.23
CDK5RAP3-236ENST00000584991 NLGN4YQ8NFZ3 816 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-236ENST00000584991 PFN4Q8NHR9 129 aa13.63□□□□□ -0.23
CDK5RAP3-236ENST00000584991 WACQ9BTA9 647 aa13.63□□□□□ -0.23
CDK5RAP3-236ENST00000584991 DIABLOQ9NR28 239 aa13.63□□□□□ -0.23
CDK5RAP3-236ENST00000584991 SIRT4Q9Y6E7 314 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-236ENST00000584991 FAM186AA6NE01 2351 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ANKRD34BA5PLL1 514 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ITGA10O75578 1167 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 OR2T7P0C7T2 308 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 PSMD4P55036 377 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 SLC26A5P58743 744 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 MRPL28Q13084 256 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 GGTLC2Q14390 218 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 PCOLCEQ15113 449 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 CCDC58Q4VC31 144 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 KLHL12Q53G59 568 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 PLA1AQ53H76 456 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ZNF767PQ75MW2 155 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 CEACAM19Q7Z692 300 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 CMIPQ8IY22 773 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 PRR22Q8IZ63 422 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 GHDCQ8N2G8 530 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ZNF614Q8N883 585 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 OR2T27Q8NH04 317 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 OIT3Q8WWZ8 545 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 SMPDL3BQ92485 455 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 UPRTQ96BW1 309 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 CCNL2Q96S94 520 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 HDHD2Q9H0R4 259 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ATP13A2Q9NQ11 1180 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 TCFL5Q9UL49 500 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 HS3ST3B1Q9Y662 390 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 DMXL1Q9Y485 3027 aa13.62□□□□□ -0.23
CDK5RAP3-236ENST00000584991 A0A0G2JMP0 313 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 TRBV11-1A0A0K0K1C0 115 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 A0A0X1KG70 313 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 A8MV72 311 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 UBL3O95164 117 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 RAB40ALP0C0E4 278 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 GKN3PP0CG01 181 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 SHC1P29353 583 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 MMP15P51511 669 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 RPS7P62081 194 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 GABREP78334 506 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ZNF85Q03923 595 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 LGALS3BPQ08380 585 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 GPR176Q14439 515 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ULK3Q6PHR2 472 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ARL9Q6T311 187 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 NR2C2APQ86WQ0 139 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ZNF441Q8N8Z8 693 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 OR4M2Q8NGB6 313 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 THAP3Q8WTV1 239 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 PGLYRP3Q96LB9 341 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ENKD1Q9H0I2 346 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 MEPEQ9NQ76 525 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 MALT1Q9UDY8 824 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 FARSAQ9Y285 508 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 CFAP54Q96N23 3096 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 IGHV1-45A0A0A0MS14 117 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 A0A0G2JK05 382 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 C7orf66A4D0T2 115 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 IL33O95760 270 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ZNF24P17028 368 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 RAB3BP20337 219 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 RPS15P62841 145 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 HSF2Q03933 536 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ACSM3Q53FZ2 586 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 SLC35D3Q5M8T2 416 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 THSD4Q6ZMP0 1018 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 UBE2J2Q8N2K1 259 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 SAMD12Q8N8I0 201 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 OR4M1Q8NGD0 313 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 OR13C2Q8NGS9 318 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 HAVCR2Q8TDQ0 301 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 C4orf36Q96KX1 117 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 MRI1Q9BV20 369 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 HCAR1Q9BXC0 346 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ZNF700Q9H0M5 742 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 MED20Q9H944 212 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 ZMIZ1Q9ULJ6 1067 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 RASD1Q9Y272 281 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 NUBP2Q9Y5Y2 271 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 CACNG2Q9Y698 323 aa13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 CNOT1A5YKK6 2376 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-236ENST00000584991 NOTOA8MTQ0 251 aa13.6□□□□□ -0.23
CDK5RAP3-236ENST00000584991 NPIPB9F8W1W9 429 aa13.6□□□□□ -0.23
CDK5RAP3-236ENST00000584991 TO15178 435 aa13.6□□□□□ -0.23
CDK5RAP3-236ENST00000584991 CTDSPLO15194 276 aa13.6□□□□□ -0.23
CDK5RAP3-236ENST00000584991 RAD1O60671 282 aa13.6□□□□□ -0.23
CDK5RAP3-236ENST00000584991 FZD7O75084 574 aa13.6□□□□□ -0.23
CDK5RAP3-236ENST00000584991 REM1O75628 298 aa13.6□□□□□ -0.23
CDK5RAP3-236ENST00000584991 PPM1BO75688 479 aa13.6□□□□□ -0.23
CDK5RAP3-236ENST00000584991 IGF2P01344 180 aa13.6□□□□□ -0.23
CDK5RAP3-236ENST00000584991 IGHEP01854 428 aa13.6□□□□□ -0.23
CDK5RAP3-236ENST00000584991 COX6A1P12074 109 aa13.6□□□□□ -0.23
CDK5RAP3-236ENST00000584991 NOS3P29474 1203 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms