RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 STSP08842 583 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 HLA-DOBP13765 273 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 NOS3P29474 1203 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 VHLP40337 213 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 SMSP52788 366 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 NPRL3Q12980 569 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 ZIK1Q3SY52 487 aaPredicted RBP16.3■□□□□ 0.2
RFFL-211ENST00000584541 GPR139Q6DWJ6 353 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 SLC27A4Q6P1M0 643 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 SLC35D2Q76EJ3 337 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 ZNF570Q96NI8 536 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 PLA2G12AQ9BZM1 189 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 TXNIPQ9H3M7 391 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 NRIP3Q9NQ35 241 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 GRHPRQ9UBQ7 328 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 EMC9Q9Y3B6 208 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 FLVCR1Q9Y5Y0 555 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 ZNF726A6NNF4 738 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 IDH3BO43837 385 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 SS18L1O75177 396 aaPredicted RBP16.29■□□□□ 0.2
RFFL-211ENST00000584541 PPP1R3DO95685 299 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 SNAP29O95721 258 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 IGHMP01871 453 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 CRHP06850 196 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 IGFBP1P08833 259 aaPredicted RBP16.29■□□□□ 0.2
RFFL-211ENST00000584541 GLI4P10075 376 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 APEHP13798 732 aaKnown RBP16.29■□□□□ 0.2
RFFL-211ENST00000584541 IFNGR1P15260 489 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 CLDN17P56750 224 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 RPL27P61353 136 aaKnown RBP16.29■□□□□ 0.2
RFFL-211ENST00000584541 ERVK-25P63136 954 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 TOP3AQ13472 1001 aaPredicted RBP16.29■□□□□ 0.2
RFFL-211ENST00000584541 PTGES3Q15185 160 aaKnown RBP16.29■□□□□ 0.2
RFFL-211ENST00000584541 IGFBP7Q16270 282 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 FAM205BPQ63HN1 556 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 TUSC5Q8IXB3 177 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 ZNF555Q8NEP9 628 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 OR8D4Q8NGM9 314 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 INTS12Q96CB8 462 aaKnown RBP16.29■□□□□ 0.2
RFFL-211ENST00000584541 ADAD1Q96M93 576 aaKnown RBP16.29■□□□□ 0.2
RFFL-211ENST00000584541 ERMAPQ96PL5 475 aaPredicted RBP16.29■□□□□ 0.2
RFFL-211ENST00000584541 PRRG3Q9BZD7 231 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 ENKD1Q9H0I2 346 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 TOR3AQ9H497 397 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 PARPBPQ9NWS1 579 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 CLEC4AQ9UMR7 237 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 NOSIPQ9Y314 301 aaKnown RBP16.29■□□□□ 0.2
RFFL-211ENST00000584541 MEMO1Q9Y316 297 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 IER3IP1Q9Y5U9 82 aa16.29■□□□□ 0.2
RFFL-211ENST00000584541 PRRC2CQ9Y520 2896 aaKnown RBP16.28■□□□□ 0.2
RFFL-211ENST00000584541 A0A1B0GUH1 482 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 H0YJX3 145 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 CCL21O00585 134 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 IMPA2O14732 288 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 ARPC3O15145 178 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 TRAF3IP2O43734 574 aaPredicted RBP16.28■□□□□ 0.2
RFFL-211ENST00000584541 TMIGD3P0DMS9 266 aaPredicted RBP16.28■□□□□ 0.2
RFFL-211ENST00000584541 GNLYP22749 145 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 GIPRP48546 466 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 BIDP55957 195 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 PMPCAQ10713 525 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 GINS1Q14691 196 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 ACKR1Q16570 336 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 PGGHGQ32M88 737 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 RIPPLY2Q5TAB7 128 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 SEM1Q6ZVN7 128 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 AAED1Q7RTV5 226 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 GCNT2Q8N0V5 402 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 RPRMLQ8N4K4 120 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 PRR7Q8TB68 274 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 TMEM45BQ96B21 275 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 SLC25A19Q9HC21 320 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 MED29Q9NX70 200 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 ING1Q9UK53 422 aaPredicted RBP16.28■□□□□ 0.2
RFFL-211ENST00000584541 ZNF346Q9UL40 294 aaKnown RBP16.28■□□□□ 0.2
RFFL-211ENST00000584541 RCE1Q9Y256 329 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 ADAM18Q9Y3Q7 739 aa16.28■□□□□ 0.2
RFFL-211ENST00000584541 SPENQ96T58 3664 aaKnown RBP16.27■□□□□ 0.2
RFFL-211ENST00000584541 A6NIZ1 184 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 HSPB2A8KAH6 182 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 BHLHE40O14503 412 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 XKRYO14609 159 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 MRPL33O75394 65 aaKnown RBP16.27■□□□□ 0.2
RFFL-211ENST00000584541 HMGN1P05114 100 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 AGTR1P30556 359 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 SDHAP31040 664 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 CEACAM8P31997 349 aaPredicted RBP16.27■□□□□ 0.2
RFFL-211ENST00000584541 GRK5P34947 590 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 ACVR1BP36896 505 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 RAP1BP61224 184 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 RAP1AP62834 184 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 CDK5Q00535 292 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 MYBPC1Q00872 1141 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 MELKQ14680 651 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 HSPB2Q16082 182 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 NIPAL3Q6P499 406 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 CASP12Q6UXS9 341 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 FAM214BQ7L5A3 538 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 FAM122BQ7Z309 247 aa16.27■□□□□ 0.2
RFFL-211ENST00000584541 LNX2Q8N448 690 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms