RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CLK1P49759 484 aaKnown RBP13.73□□□□□ -0.21
SKA2-209ENST00000583976 RASSF2P50749 326 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 CSNK2A1P68400 391 aaPredicted RBP13.73□□□□□ -0.21
SKA2-209ENST00000583976 C9orf135Q5VTT2 229 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 CCDC121Q6ZUS5 278 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 DHFR2Q86XF0 187 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 HIPK1Q86Z02 1210 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 UBE2J2Q8N2K1 259 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 ZNF525Q8N782 197 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 MUCL1Q96DR8 90 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 KTI12Q96EK9 354 aaPredicted RBP13.73□□□□□ -0.21
SKA2-209ENST00000583976 SLC41A3Q96GZ6 507 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 PYURFQ96I23 114 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 CADM1Q9BY67 442 aaKnown RBP13.73□□□□□ -0.21
SKA2-209ENST00000583976 C12orf10Q9HB07 376 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 BARX1Q9HBU1 254 aaPredicted RBP13.73□□□□□ -0.21
SKA2-209ENST00000583976 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.73□□□□□ -0.21
SKA2-209ENST00000583976 ACTR3BQ9P1U1 418 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 RHCGQ9UBD6 479 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 POU2F3Q9UKI9 436 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 HDGFL3Q9Y3E1 203 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 SLC25A15Q9Y619 301 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 A0A087WUJ7 227 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 M0R1B8 84 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 EBAG9O00559 213 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 LY6HO94772 140 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 ITGA5P08648 1049 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 ZNF16P17020 682 aaPredicted RBP13.72□□□□□ -0.21
SKA2-209ENST00000583976 CBLP22681 906 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 RPS5P46782 204 aaKnown RBP13.72□□□□□ -0.21
SKA2-209ENST00000583976 MAP2K6P52564 334 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 EGR4Q05215 589 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 OR7A5Q15622 319 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 TMEM249Q2WGJ8 235 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 C1orf140Q5VVS0 124 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 AGAP6Q5VW22 663 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 FBXW9Q5XUX1 488 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 SLC22A25Q6T423 547 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 CCDC103Q8IW40 242 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 MCUR1Q96AQ8 359 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 APH1AQ96BI3 265 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 SLC25A36Q96CQ1 311 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 USB1Q9BQ65 265 aaKnown RBP13.72□□□□□ -0.21
SKA2-209ENST00000583976 C1QTNF6Q9BXI9 259 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 FAIMQ9NVQ4 179 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 RIMS3Q9UJD0 308 aa13.72□□□□□ -0.21
SKA2-209ENST00000583976 NOSIPQ9Y314 301 aaKnown RBP13.72□□□□□ -0.21
SKA2-209ENST00000583976 IGKV1D-42A0A075B6H8 117 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 CIB4A0PJX0 185 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 A8MV72 311 aaPredicted RBP13.71□□□□□ -0.21
SKA2-209ENST00000583976 hCG_2039718K7EN88 272 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 CHP2O43745 196 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 LYPD3O95274 346 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 AHSA1O95433 338 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 STAMBPO95630 424 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 PMS2P2O95744 297 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 CD40P25942 277 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 TTKP33981 857 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 CASP12Q6UXS9 341 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 WDR88Q6ZMY6 472 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 NKAIN4Q8IVV8 208 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 STK35Q8TDR2 534 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 ASB9Q96DX5 294 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 ZHX1-C8orf76Q96EF9 292 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 LRGUKQ96M69 825 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 SEPHS2Q99611 448 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 TAPBPLQ9BX59 468 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 GRIP2Q9C0E4 1043 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 MUC13Q9H3R2 512 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 EMC3Q9P0I2 261 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 MALT1Q9UDY8 824 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 A4GNTQ9UNA3 340 aa13.71□□□□□ -0.21
SKA2-209ENST00000583976 LIPT2A6NK58 231 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 KPNA4O00629 521 aaPredicted RBP13.7□□□□□ -0.22
SKA2-209ENST00000583976 PHF1O43189 567 aaPredicted RBP13.7□□□□□ -0.22
SKA2-209ENST00000583976 NPIPB7O75200 414 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 DIRAS1O95057 198 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 AKR7A3O95154 331 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 OR5F1O95221 314 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 GPIP06744 558 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 FUT4P22083 530 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 SLC35A1P78382 337 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 CHRFAM7AQ494W8 412 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 SWT1Q5T5J6 900 aaKnown RBP13.7□□□□□ -0.22
SKA2-209ENST00000583976 LCN8Q6JVE9 175 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 PGM2L1Q6PCE3 622 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 TTC33Q6PID6 262 aaPredicted RBP13.7□□□□□ -0.22
SKA2-209ENST00000583976 CLEC2AQ6UVW9 174 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 TMEM108Q6UXF1 575 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 TSEN54Q7Z6J9 526 aaKnown RBP13.7□□□□□ -0.22
SKA2-209ENST00000583976 MUC15Q8N387 334 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 C10orf53Q8N6V4 93 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 OR10H5Q8NGA6 315 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 TAAR8Q969N4 342 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 PRRC1Q96M27 445 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 DHRS9Q9BPW9 319 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 PRSS27Q9BQR3 290 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 RHNO1Q9BSD3 238 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 PTDSS2Q9BVG9 487 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 FNDC11Q9BVV2 318 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms