RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 ITM2AO43736 263 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 MRPL33O75394 65 aaKnown RBP6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 SEC14L2O76054 403 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 HSPA4LO95757 839 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 OR4A8P0C604 315 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 NEFHP12036 1026 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 PRG2P13727 222 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 KRT4P19013 534 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 MATN1P21941 496 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 THBS4P35443 961 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 HPCAL1P37235 193 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 ACAA2P42765 397 aaKnown RBP6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 CDKN2CP42773 168 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 IDH2P48735 452 aaKnown RBP6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 CDH15P55291 814 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 EFNB3Q15768 340 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 SYPL1Q16563 259 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 WHAMMP3Q1A5X7 153 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 PGS1Q32NB8 556 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 CFAP157Q5JU67 520 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 SAXO2Q658L1 398 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 Q6ZSN1 163 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 GRINAQ7Z429 371 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 SPATA19Q7Z5L4 167 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 EPHX4Q8IUS5 362 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 KDM8Q8N371 416 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 SVOPLQ8N434 492 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 OR9K2Q8NGE7 335 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 PIGXQ8TBF5 258 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 MIPOL1Q8TD10 442 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 TMEM45BQ96B21 275 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 ROPN1LQ96C74 230 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 CLPTM1LQ96KA5 538 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 SLC35G5Q96KT7 338 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 ZNF75AQ96N20 296 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 WWC2-AS2Q96NR7 200 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 DOK1Q99704 481 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 VRK1Q99986 396 aaPredicted RBP6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 PIMREGQ9BSJ6 248 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 HOXD1Q9GZZ0 328 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 TPK1Q9H3S4 243 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 ESM1Q9NQ30 184 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 TMEM140Q9NV12 185 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 EMC3Q9P0I2 261 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 TMEM181Q9P2C4 612 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 FAF1Q9UNN5 650 aaPredicted RBP6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 TMED5Q9Y3A6 229 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 TMED7Q9Y3B3 224 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 LOC390937A0A1W2PQ73 354 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 LIPT2A6NK58 231 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 H3BNH8 94 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 HMGN4O00479 90 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 ZNF500O60304 480 aaPredicted RBP6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 SPAG7O75391 227 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 STX11O75558 287 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 NCR1O76036 304 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 ZNF432O94892 652 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 IGKV3-15P01624 115 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 CSF3P09919 207 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 GKN3PP0CG01 181 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 TACR3P29371 465 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 MPGP29372 298 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 IL12AP29459 219 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 SERPINF1P36955 418 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 APOBEC1P41238 236 aaKnown RBP6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 MVDP53602 400 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 CSNK2A1P68400 391 aaPredicted RBP6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 CEACAM7Q14002 265 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 CCDC153Q494R4 210 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 SPDYE7PQ495Y7 208 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 TMEM255AQ5JRV8 349 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 ELFN2Q5R3F8 820 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 ANKRD16Q6P6B7 361 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 KLHL17Q6TDP4 642 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 SLC46A3Q7Z3Q1 461 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 R3HCC1LQ7Z5L2 792 aaKnown RBP6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 C17orf78Q8N4C9 275 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 SLC25A43Q8WUT9 341 aaPredicted RBP6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 TAF15Q92804 592 aaKnown RBP eCLIP6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 YIPF5Q969M3 257 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 CCDC126Q96EE4 140 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 AURKBQ96GD4 344 aaPredicted RBP6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 PPP1R36Q96LQ0 422 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 SLC38A2Q96QD8 506 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 RHOXF2Q9BQY4 288 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 TRMOQ9BU70 441 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 PTDSS2Q9BVG9 487 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 RACGAP1Q9H0H5 632 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 ZNF224Q9NZL3 707 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 B3GAT1Q9P2W7 334 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 AMDHD2Q9Y303 409 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 HDGFL3Q9Y3E1 203 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 WDR45Q9Y484 360 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 NOTCH1P46531 2555 aa6.76□□□□□ -1.33
PPP4R1-225ENST00000583438 ARPC4-TTLL3A0A0A6YYG9 625 aa6.75□□□□□ -1.33
PPP4R1-225ENST00000583438 IGHV2OR16-5A0A0B4J2B6 119 aa6.75□□□□□ -1.33
PPP4R1-225ENST00000583438 AQP7P3A6NL99 342 aa6.75□□□□□ -1.33
PPP4R1-225ENST00000583438 FTCDNL1E5RQL4 147 aa6.75□□□□□ -1.33
PPP4R1-225ENST00000583438 H3BQF6 201 aa6.75□□□□□ -1.33
PPP4R1-225ENST00000583438 hCG_2039718K7EN88 272 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms