RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 IFNA2P01563 188 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 H1F0P07305 194 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 SOD3P08294 240 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 LINGO3P0C6S8 592 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 DANCRP0C864 163 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ADH6P28332 368 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 EPHA2P29317 976 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 CDKN1AP38936 164 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 RPL5P46777 297 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 TUBA4AP68366 448 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 POU6F2P78424 691 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 CD47Q08722 323 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 FOXF1Q12946 379 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 NPRL3Q12980 569 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 CDK5R2Q13319 367 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 PIN1Q13526 163 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 DGCR6Q14129 220 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 P2RY6Q15077 328 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 SEC23BQ15437 767 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 TSC22D1Q15714 1073 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 TAB1Q15750 504 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 CD226Q15762 336 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 MAPK14Q16539 360 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 C6orf141Q5SZD1 244 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 TTC33Q6PID6 262 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 FCRLAQ7L513 359 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 NUFIP2Q7Z417 695 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 TUSC5Q8IXB3 177 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ZNF619Q8N2I2 560 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 TSPAN14Q8NG11 270 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 VANGL1Q8TAA9 524 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 PHOSPHO1Q8TCT1 267 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ADAMTS16Q8TE57 1224 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 SMAP2Q8WU79 429 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 KISS1RQ969F8 398 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 PITX2Q99697 317 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 GABARAPL3Q9BY60 117 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 SRXN1Q9BYN0 137 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 MRPS26Q9BYN8 205 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 POTEKPQ9BYX7 375 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 QRSL1Q9H0R6 528 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 SLCO5A1Q9H2Y9 848 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 GP6Q9HCN6 339 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 POLE3Q9NRF9 147 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 YAE1D1Q9NRH1 226 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 RHCGQ9UBD6 479 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 MKLN1Q9UL63 735 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ZNF232Q9UNY5 417 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 SLC9A8Q9Y2E8 581 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 WDR45Q9Y484 360 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ORC6Q9Y5N6 252 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 HSPE1-MOB4S4R3N1 261 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 CSPG4Q6UVK1 2322 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 RTTNQ86VV8 2226 aa8.6□□□□□ -1.03
CDK5RAP3-227ENST00000583352 SH3PXD2BA1X283 911 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 RNF212BA8MTL3 300 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 FAAHO00519 579 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 CD5LO43866 347 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 STX11O75558 287 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 NTN1O95631 604 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 NUDT14O95848 222 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ADAP00813 363 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 YES1P07947 543 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 THBS1P07996 1170 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 SHC1P29353 583 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ACVR1BP36896 505 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ALDH3B2P48448 385 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 CDH15P55291 814 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 SUMO3P55854 103 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ZNF117Q03924 483 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 FAPQ12884 760 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 TMEM176BQ3YBM2 270 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ZNF672Q499Z4 452 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 DCST2Q5T1A1 773 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 CCNJQ5T5M9 372 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 FOXB2Q5VYV0 432 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 PODNL1Q6PEZ8 512 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 DEF8Q6ZN54 512 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 BHLHA15Q7RTS1 189 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 PEX5LQ8IYB4 626 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 C8orf59Q8N0T1 100 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ZNF786Q8N393 782 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ZNF527Q8NB42 609 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 KBTBD8Q8NFY9 601 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 OR9Q2Q8NGE9 314 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 HDAC2Q92769 488 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 NEUROG1Q92886 237 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 HS6ST2Q96MM7 605 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 KLHDC3Q9BQ90 382 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 PRR14Q9BWN1 585 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 HOXD1Q9GZZ0 328 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 RIBC2Q9H4K1 309 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 BARX1Q9HBU1 254 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 PAPOLBQ9NRJ5 636 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 KRT84Q9NSB2 600 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 MAN2C1Q9NTJ4 1040 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 REV1Q9UBZ9 1251 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ZNF443Q9Y2A4 671 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 JMJD1CQ15652 2540 aa8.59□□□□□ -1.03
CDK5RAP3-227ENST00000583352 ROS1P08922 2347 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms