RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	CAT	P04040	527 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	LYN	P07948	512 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	CDH1	P12830	882 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	NR4A1	P22736	598 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	ATP5F1	P24539	256 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	ASMT	P46597	345 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	NUDT2	P50583	147 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	PRKAA2	P54646	552 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	AQP4	P55087	323 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	PKNOX1	P55347	436 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	DNAJB13	P59910	316 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	STXBP1	P61764	594 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	FHL3	Q13643	280 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	DAG1	Q14118	895 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	ZNF267	Q14586	743 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	MAD2L1BP	Q15013	274 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	HAGH	Q16775	308 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	PLPPR5	Q32ZL2	321 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	ADPRM	Q3LIE5	342 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	UNC50	Q53HI1	259 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	OGFRL1	Q5TC84	451 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	RNF220	Q5VTB9	566 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	METTL21C	Q5VZV1	264 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	LYPD1	Q8N2G4	141 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	GVQW1	Q8N7I0	195 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	CCNYL1	Q8N7R7	359 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	ANKRD53	Q8N9V6	530 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	OR5AU1	Q8NGC0	362 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	SLC26A7	Q8TE54	656 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	SKA2	Q8WVK7	121 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	MYDGF	Q969H8	173 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	APH1A	Q96BI3	265 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	PPWD1	Q96BP3	646 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	MS4A6E	Q96DS6	147 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	CMTM5	Q96DZ9	223 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	ELMOD3	Q96FG2	381 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	WDR89	Q96FK6	387 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	KLHL15	Q96M94	604 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	YIPF3	Q9GZM5	350 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	LAT2	Q9GZY6	243 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	MRPL46	Q9H2W6	279 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	GSTO2	Q9H4Y5	243 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	SEC61A2	Q9H9S3	476 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	NSMCE4A	Q9NXX6	385 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	MYEF2	Q9P2K5	600 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	RIMS3	Q9UJD0	308 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	ACOT9	Q9Y305	439 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	AAR2	Q9Y312	384 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	NPTN	Q9Y639	398 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	TCRBV4S1A1T	A0A5B7	111 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	MAGEA13P	A6NCF6	341 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	AP3B1	O00203	1094 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	F2RL2	O00254	374 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	PPP6C	O00743	305 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	SLC22A2	O15244	555 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	CFLAR	O15519	480 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	SYNGR1	O43759	233 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	OTC	P00480	354 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	IGHV3-9	P01782	118 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	SERPIND1	P05546	499 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	LTA4H	P09960	611 aa	Known RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	ZCCHC18	P0CG32	403 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	SMIM18	P0DKX4	95 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	IGHV4-30-4	P0DP06	118 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	UQCRB	P14927	111 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	STMN1	P16949	149 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	ZNF14	P17017	642 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	TSPAN8	P19075	237 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	GLRX	P35754	106 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	PPARG	P37231	505 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	MYCNOS	P40205	109 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	HNF4A	P41235	474 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	INSL3	P51460	131 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	CDKL1	Q00532	357 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	ID2	Q02363	134 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	ACVR1	Q04771	509 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	CYLC2	Q14093	348 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	CSHL1	Q14406	222 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	HABP2	Q14520	560 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	OR4D1	Q15615	310 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	GSTA3	Q16772	222 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	LRRC36	Q1X8D7	754 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	UGT3A2	Q3SY77	523 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	CFAP157	Q5JU67	520 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	NXN	Q6DKJ4	435 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	C8orf82	Q6P1X6	216 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	VASH1	Q7L8A9	365 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	LCA5	Q86VQ0	697 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	WFDC3	Q8IUB2	231 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	UBE2J2	Q8N2K1	259 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	PQLC1	Q8N2U9	271 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	RNF148	Q8N7C7	305 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	ZNF527	Q8NB42	609 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	IL17RD	Q8NFM7	739 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	RP9	Q8TA86	221 aa	Known RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	RIT1	Q92963	219 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	RNF183	Q96D59	192 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	CDKN2AIPNL	Q96HQ2	116 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	MRGPRX4	Q96LA9	322 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	UBXN10	Q96LJ8	280 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms