RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ZNF726	A6NNF4	738 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	ZNF99	A8MXY4	864 aa	Predicted RBP	10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708		H7C1Q1	480 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708		H7C417	338 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	OR5F1	O95221	314 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	OR6A2	O95222	327 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	IGKV3-15	P01624	115 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	IGLV1-44	P01699	117 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CRYAA	P02489	173 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	HIST1H2AB	P04908	130 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CDH2	P19022	906 aa	Predicted RBP	10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	APOBEC3A	P31941	199 aa	Predicted RBP	10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	IFNA8	P32881	189 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	KDELR2	P33947	212 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	FABP6	P51161	128 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	DSCR9	P59020	149 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	SLC25A3	Q00325	362 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	IL1RL1	Q01638	556 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	POU3F1	Q03052	451 aa	Predicted RBP	10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	ZNF74	Q16587	644 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	C11orf71	Q6IPW1	123 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CLEC9A	Q6UXN8	241 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	HIST3H2A	Q7L7L0	130 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	LINGO2	Q7L985	606 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	OR2T12	Q8NG77	320 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	OR4F15	Q8NGB8	312 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	VANGL1	Q8TAA9	524 aa	Predicted RBP	10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	LZIC	Q8WZA0	190 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	HIST1H2AC	Q93077	130 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	HS6ST2	Q96MM7	605 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	MOGAT1	Q96PD6	335 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	KCNS3	Q9BQ31	491 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	EFCAB1	Q9HAE3	211 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CRLF2	Q9HC73	371 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	NANS	Q9NR45	359 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	SLC7A7	Q9UM01	511 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	SH3GLB1	Q9Y371	365 aa		10.99	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	NAV3	Q8IVL0	2385 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	SLC35F4	A4IF30	521 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	MGRN1	O60291	552 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	PDE5A	O76074	875 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	HPR	P00739	348 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	THY1	P04216	161 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	ADORA3	P0DMS8	318 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CBR1	P16152	277 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	ARR3	P36575	388 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	ARF1	P84077	181 aa	Known RBP	10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CLEC12B	Q2HXU8	276 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CEACAM16	Q2WEN9	425 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	HACD2	Q6Y1H2	254 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	DNM1P46	Q6ZS02	220 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	HDDC2	Q7Z4H3	204 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CARM1	Q86X55	608 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	RBM45	Q8IUH3	476 aa	Known RBP	10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	MICU2	Q8IYU8	434 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	OR4D11	Q8NGI4	311 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	OR6X1	Q8NH79	312 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	LIPH	Q8WWY8	451 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	C1QTNF6	Q9BXI9	259 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	NELFA	Q9H3P2	528 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	FBXL3	Q9UKT7	428 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	USP22	Q9UPT9	525 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	ATP23	Q9Y6H3	246 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	PMF1-BGLAP	U3KQ54	211 aa		10.98	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	HIVEP2	P31629	2446 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	IGHV1-18	A0A0C4DH31	117 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	TRIM64	A6NGJ6	449 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	TRIM64B	A6NI03	449 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	VSTM5	A8MXK1	200 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CENPBD1	B2RD01	187 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	IGHV4-39	P01824	125 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	MT-ND1	P03886	318 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	ASAH2B	P0C7U1	165 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	COX4I1	P13073	169 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CBL	P22681	906 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	AHCY	P23526	432 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	TAS2R41	P59536	307 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	SELENOW	P63302	87 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	LGALS3BP	Q08380	585 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	SPOCK1	Q08629	439 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CYBRD1	Q53TN4	286 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	WDR88	Q6ZMY6	472 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	DPPA2	Q7Z7J5	298 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	NUP37	Q8NFH4	326 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	RCN3	Q96D15	328 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CMTM5	Q96DZ9	223 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	PRSS27	Q9BQR3	290 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	GSX1	Q9H4S2	264 aa	Predicted RBP	10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	TAS2R5	Q9NYW4	299 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	ARMCX1	Q9P291	453 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	STX18	Q9P2W9	335 aa	Known RBP	10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	RIMS3	Q9UJD0	308 aa		10.97	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CSPG4	Q6UVK1	2322 aa		10.96	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	NPIPB13	A6NJU9	1138 aa		10.96	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	NPIPB4	C9JG80	1138 aa		10.96	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	ATP6V1G2-DDX39B	F2Z307	99 aa		10.96	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708		M0R3G1	203 aa		10.96	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CH25H	O95992	272 aa		10.96	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	CSF3	P09919	207 aa		10.96	□□□□□ -0.65
CDK5RAP3-222	ENST00000581708	HLA-DOB	P13765	273 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms