RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 ALDH3A1P30838 453 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 LSP1P33241 339 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 CRYBB2P43320 205 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 PTDSS1P48651 473 aaKnown RBP10.86□□□□□ -0.67
SS18-219ENST00000581570 SELENOVP59797 346 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 EMX2Q04743 252 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 BAMBIQ13145 260 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 TUSC1Q2TAM9 212 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 PHYHD1Q5SRE7 291 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 ANXA8L1Q5VT79 327 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 ATG16L1Q676U5 607 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 TMEM154Q6P9G4 183 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 ZNF813Q6ZN06 617 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 RETREG3Q86VR2 466 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 RNF130Q86XS8 419 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 PEX5LQ8IYB4 626 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 OR2M2Q96R28 347 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 GPA33Q99795 319 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 HINT3Q9NQE9 182 aaKnown RBP10.86□□□□□ -0.67
SS18-219ENST00000581570 NOP53Q9NZM5 478 aaKnown RBP10.86□□□□□ -0.67
SS18-219ENST00000581570 B3GAT1Q9P2W7 334 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 SLC7A8Q9UHI5 535 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 POFUT2Q9Y2G5 429 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 WIPI2Q9Y4P8 454 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 PRKDCP78527 4128 aaKnown RBP10.86□□□□□ -0.67
SS18-219ENST00000581570 DSPPQ9NZW4 1301 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 IGHV1-69-2A0A0G2JMI3 117 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 CDHR4A6H8M9 788 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 CLDN25C9JDP6 229 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 AKAP8O43823 692 aaKnown RBP10.85□□□□□ -0.67
SS18-219ENST00000581570 RAB36O95755 333 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 CLPTM1O96005 669 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 NR2F1P10589 423 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 KRT4P19013 534 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 NCF2P19878 526 aaPredicted RBP10.85□□□□□ -0.67
SS18-219ENST00000581570 RPS5P46782 204 aaKnown RBP10.85□□□□□ -0.67
SS18-219ENST00000581570 GIPRP48546 466 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 ANXA11P50995 505 aaKnown RBP10.85□□□□□ -0.67
SS18-219ENST00000581570 RAB1AP62820 205 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 LCN2P80188 198 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 CHI3L2Q15782 390 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 PCGF3Q3KNV8 242 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 CARD17Q5XLA6 110 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 HIST2H2BDQ6DRA6 164 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 RGS7BPQ6MZT1 257 aaPredicted RBP10.85□□□□□ -0.67
SS18-219ENST00000581570 VRK2Q86Y07 508 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 TMEM123Q8N131 208 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 C4orf33Q8N1A6 199 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 SYT14Q8NB59 555 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 RAB1CQ92928 201 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 SLC25A28Q96A46 364 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 TIMD4Q96H15 378 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 C1orf147Q96MC9 270 aaPredicted RBP10.85□□□□□ -0.67
SS18-219ENST00000581570 PTDSS2Q9BVG9 487 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 DENND2DQ9H6A0 471 aaPredicted RBP10.85□□□□□ -0.67
SS18-219ENST00000581570 GRPEL1Q9HAV7 217 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 ASIC5Q9NY37 505 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 NKIRAS2Q9NYR9 191 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 ZNF69Q9UC07 566 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 SEC14L4Q9UDX3 406 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 NUP50Q9UKX7 468 aa10.85□□□□□ -0.67
SS18-219ENST00000581570 TPD52L2O43399 206 aaKnown RBP10.84□□□□□ -0.67
SS18-219ENST00000581570 RNASE1P07998 156 aaKnown RBP10.84□□□□□ -0.67
SS18-219ENST00000581570 PRG2P13727 222 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 GCH1P30793 250 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 AQP5P55064 265 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 CASP8Q14790 479 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 RAB39AQ14964 217 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 WHAMMP3Q1A5X7 153 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 LIN52Q52LA3 116 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 ZNF836Q6ZNA1 936 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 USP51Q70EK9 711 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 ZNF771Q7L3S4 317 aaPredicted RBP10.84□□□□□ -0.67
SS18-219ENST00000581570 WDFY1Q8IWB7 410 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 C20orf196Q8IYI0 205 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 C17orf53Q8N3J3 647 aaPredicted RBP10.84□□□□□ -0.67
SS18-219ENST00000581570 OR52P1PQ8NH57 321 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 SNX33Q8WV41 574 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 TAF15Q92804 592 aaKnown RBP eCLIP10.84□□□□□ -0.67
SS18-219ENST00000581570 POP5Q969H6 163 aaKnown RBP10.84□□□□□ -0.67
SS18-219ENST00000581570 TSPAN32Q96QS1 320 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 GAL3ST1Q99999 423 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 MECRQ9BV79 373 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 B3GAT2Q9NPZ5 323 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 DECR2Q9NUI1 292 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 PLEK2Q9NYT0 353 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 FBXL3Q9UKT7 428 aa10.84□□□□□ -0.67
SS18-219ENST00000581570 SLC22A23A1A5C7 686 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 M0R082 166 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 AIM2O14862 343 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 GPR37O15354 613 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 TRAF3IP2O43734 574 aaPredicted RBP10.83□□□□□ -0.68
SS18-219ENST00000581570 UBL3O95164 117 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 B4GALT1P15291 398 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 MDKP21741 143 aaPredicted RBP10.83□□□□□ -0.68
SS18-219ENST00000581570 KLF3P57682 345 aaPredicted RBP10.83□□□□□ -0.68
SS18-219ENST00000581570 TXNL4AP83876 142 aaKnown RBP10.83□□□□□ -0.68
SS18-219ENST00000581570 EGR4Q05215 589 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 CAMK2DQ13557 499 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 MFSD13AQ14CX5 517 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms