RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 SLC6A18Q96N87 628 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 TAF9BQ9HBM6 251 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 PIAS3Q9Y6X2 628 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 ADAM12O43184 909 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 HLA-HP01893 362 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 FLI1Q01543 452 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 HNRNPA1L2Q32P51 320 aaKnown RBP13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 ZNF566Q969W8 418 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 CXorf36Q9H7Y0 433 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 TRAV36DV7A0A075B6V5 113 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 SERINC4A6NH21 518 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 IMPA2O14732 288 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 TAPBPO15533 448 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 CHRM4P08173 479 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 ANXA7P20073 488 aaKnown RBP13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 BAGE3Q86Y29 109 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 BAGE2Q86Y30 109 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 OR14A16Q8NHC5 309 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 SMIM14Q96QK8 99 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 ULBP2Q9BZM5 246 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 SELENOIQ9C0D9 397 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 SRPK3Q9UPE1 567 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 WIF1Q9Y5W5 379 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 KPTNQ9Y664 436 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 I6L893 689 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 SYT5O00445 386 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 CPEP16870 476 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 CEBPBP17676 345 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 RFX2P48378 723 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 SSX9Q7RTT3 188 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 PGBD5Q8N414 524 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 FAM3DQ96BQ1 224 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 RPH3ALQ9UNE2 315 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 MCRIP1C9JLW8 97 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 CBX7O95931 251 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 MGST1P10620 155 aaKnown RBP13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 TACR1P25103 407 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 MAOBP27338 520 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 PCSK6P29122 969 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 SLC35D2Q76EJ3 337 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 TM4SF18Q96CE8 201 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 C5P01031 1676 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 ZIC2O95409 532 aaPredicted RBP13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 OLFM2O95897 454 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 CSF2RAP15509 400 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 HTR5AP47898 357 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 TRNP1Q6NT89 227 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 MISPQ8IVT2 679 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 SKA3Q8IX90 412 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 KLHDC8BQ8IXV7 354 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 C14orf79Q96F83 325 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 NMNAT3Q96T66 252 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 PTGER4P35408 488 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 KIAA1024LP59773 190 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 EEF1A2Q05639 463 aaKnown RBP13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 ZP2Q05996 745 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 OXA1LQ15070 435 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 SMIM15Q7Z3B0 74 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 C15orf54Q8N8G6 183 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 LFNGQ8NES3 379 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 OR4A16Q8NH70 328 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 OBP2BQ9NPH6 170 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 TRAPPC2LQ9UL33 140 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 MED16Q9Y2X0 877 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 MYH4Q9Y623 1939 aa13.46□□□□□ -0.25
CSNK1D-217ENST00000581241 P2RY10O00398 339 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 CALCBP10092 127 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 TACR3P29371 465 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 BLVRBP30043 206 aaPredicted RBP13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 HOXC13P31276 330 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 RACK1P63244 317 aaKnown RBP13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 SLC10A1Q14973 349 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 DEFB133Q30KQ1 61 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 VASH1Q7L8A9 365 aaPredicted RBP13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 C1orf87Q8N0U7 546 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 INSM2Q96T92 566 aaPredicted RBP13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 SLC25A21Q9BQT8 299 aaPredicted RBP13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 PPP1R2P9O14990 202 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 ADRB1P08588 477 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 PSMB3P49720 205 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 GP2P55259 537 aaKnown RBP13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 CLDN2P57739 230 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 PRDX1Q06830 199 aaKnown RBP13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 IKZF1Q13422 519 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 TIGD3Q6B0B8 471 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 Q6ZSR9 355 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 TMEM106AQ96A25 262 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 HIF1ANQ9NWT6 349 aa13.46□□□□□ -0.26
CSNK1D-217ENST00000581241 PHF1O43189 567 aaPredicted RBP13.45□□□□□ -0.26
CSNK1D-217ENST00000581241 GALR3O60755 368 aaPredicted RBP13.45□□□□□ -0.26
CSNK1D-217ENST00000581241 TRIM23P36406 574 aa13.45□□□□□ -0.26
CSNK1D-217ENST00000581241 ZNF133P52736 654 aaPredicted RBP13.45□□□□□ -0.26
CSNK1D-217ENST00000581241 SLC7A9P82251 487 aa13.45□□□□□ -0.26
CSNK1D-217ENST00000581241 ZMAT1Q5H9K5 638 aa13.45□□□□□ -0.26
CSNK1D-217ENST00000581241 OR2L13Q8N349 312 aa13.45□□□□□ -0.26
CSNK1D-217ENST00000581241 HSD17B8Q92506 261 aa13.45□□□□□ -0.26
CSNK1D-217ENST00000581241 SLC25A32Q9H2D1 315 aa13.45□□□□□ -0.26
CSNK1D-217ENST00000581241 OPN1LWP04000 364 aa13.45□□□□□ -0.26
CSNK1D-217ENST00000581241 BMPR1AP36894 532 aa13.45□□□□□ -0.26
CSNK1D-217ENST00000581241 SLC36A2Q495M3 483 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms