RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 CCDC115Q96NT0 180 aa16.33■□□□□ 0.2
NDEL1-209ENST00000580738 DUX5Q96PT3 197 aa16.33■□□□□ 0.2
NDEL1-209ENST00000580738 MKS1Q9NXB0 559 aa16.33■□□□□ 0.2
NDEL1-209ENST00000580738 ZNF224Q9NZL3 707 aa16.33■□□□□ 0.2
NDEL1-209ENST00000580738 CHST2Q9Y4C5 530 aa16.33■□□□□ 0.2
NDEL1-209ENST00000580738 WNK2Q9Y3S1 2297 aa16.33■□□□□ 0.2
NDEL1-209ENST00000580738 NOTCH1P46531 2555 aa16.33■□□□□ 0.2
NDEL1-209ENST00000580738 PRKDCP78527 4128 aaKnown RBP16.32■□□□□ 0.2
NDEL1-209ENST00000580738 J3QLI3 93 aa16.32■□□□□ 0.2
NDEL1-209ENST00000580738 FSHBP01225 129 aa16.32■□□□□ 0.2
NDEL1-209ENST00000580738 GTF2E2P29084 291 aaKnown RBP16.32■□□□□ 0.2
NDEL1-209ENST00000580738 SERPINB5P36952 375 aa16.32■□□□□ 0.2
NDEL1-209ENST00000580738 CDKN2CP42773 168 aa16.32■□□□□ 0.2
NDEL1-209ENST00000580738 GIPRP48546 466 aa16.32■□□□□ 0.2
NDEL1-209ENST00000580738 PTDSS1P48651 473 aaKnown RBP16.32■□□□□ 0.2
NDEL1-209ENST00000580738 RPS23P62266 143 aaKnown RBP16.32■□□□□ 0.2
NDEL1-209ENST00000580738 GALK2Q01415 458 aa16.32■□□□□ 0.2
NDEL1-209ENST00000580738 LIN52Q52LA3 116 aa16.32■□□□□ 0.2
NDEL1-209ENST00000580738 SERPINA11Q86U17 422 aa16.32■□□□□ 0.2
NDEL1-209ENST00000580738 LRRC17Q8N6Y2 441 aa16.32■□□□□ 0.2
NDEL1-209ENST00000580738 UBLCP1Q8WVY7 318 aaPredicted RBP16.32■□□□□ 0.2
NDEL1-209ENST00000580738 ANP32BQ92688 251 aaKnown RBP16.32■□□□□ 0.2
NDEL1-209ENST00000580738 DVL3Q92997 716 aaPredicted RBP16.32■□□□□ 0.2
NDEL1-209ENST00000580738 C7orf69Q9H7B7 122 aa16.32■□□□□ 0.2
NDEL1-209ENST00000580738 NTN4Q9HB63 628 aa16.32■□□□□ 0.2
NDEL1-209ENST00000580738 PRDM4Q9UKN5 801 aa16.32■□□□□ 0.2
NDEL1-209ENST00000580738 M0R082 166 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 TRAF3IP2O43734 574 aaPredicted RBP16.31■□□□□ 0.2
NDEL1-209ENST00000580738 SPAG7O75391 227 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 CLPTM1O96005 669 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 B4GALT1P15291 398 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 FPR2P25090 351 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 S100A3P33764 101 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 HOXC5Q00444 222 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 NKPD1Q17RQ9 610 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 ZNF813Q6ZN06 617 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 WDFY1Q8IWB7 410 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 C20orf196Q8IYI0 205 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 SIGLECL1Q8N7X8 197 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 ZNF417Q8TAU3 575 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 TAAR8Q969N4 342 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 RAB39BQ96DA2 213 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 TEX37Q96LM6 180 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 TSPAN32Q96QS1 320 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 ZNF587Q96SQ5 575 aaPredicted RBP16.31■□□□□ 0.2
NDEL1-209ENST00000580738 EMC6Q9BV81 110 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 UNKLQ9H9P5 680 aaKnown RBP16.31■□□□□ 0.2
NDEL1-209ENST00000580738 PPCSQ9HAB8 311 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 TAAR3PQ9P1P4 343 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 BTNL2Q9UIR0 455 aa16.31■□□□□ 0.2
NDEL1-209ENST00000580738 ZNF346Q9UL40 294 aaKnown RBP16.31■□□□□ 0.2
NDEL1-209ENST00000580738 ZNF443Q9Y2A4 671 aaPredicted RBP16.31■□□□□ 0.2
NDEL1-209ENST00000580738 DSPPQ9NZW4 1301 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 IGHV2-5P01817 119 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 HLA-DOBP13765 273 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 CBLP22681 906 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 ZFP36P26651 326 aaKnown RBP16.3■□□□□ 0.2
NDEL1-209ENST00000580738 ANXA11P50995 505 aaKnown RBP16.3■□□□□ 0.2
NDEL1-209ENST00000580738 RAB1AP62820 205 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 RAB39AQ14964 217 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 MFSD13AQ14CX5 517 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 ZNF621Q6ZSS3 439 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 ZNF627Q7L945 461 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 LRRC34Q8IZ02 419 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 MGARPQ8TDB4 240 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 TCP10LQ8TDR4 215 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 LRRC58Q96CX6 371 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 PANX1Q96RD7 426 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 RHOXF2Q9BQY4 288 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 WIPI2Q9Y4P8 454 aa16.3■□□□□ 0.2
NDEL1-209ENST00000580738 C17orf100A8MU93 164 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 E9PBE3 544 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 AIM2O14862 343 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 ITM2AO43736 263 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 FZD7O75084 574 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 RAB36O95755 333 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 HPRP00739 348 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 PATE4P0C8F1 98 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 GRPRP30550 384 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 CRYBB2P43320 205 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 NME5P56597 212 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 RNF220Q5VTB9 566 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 H1FNTQ75WM6 255 aaPredicted RBP16.29■□□□□ 0.2
NDEL1-209ENST00000580738 ZNF771Q7L3S4 317 aaPredicted RBP16.29■□□□□ 0.2
NDEL1-209ENST00000580738 ZNF584Q8IVC4 421 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 TRIML2Q8N7C3 387 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 TAF15Q92804 592 aaKnown RBP eCLIP16.29■□□□□ 0.2
NDEL1-209ENST00000580738 HINT3Q9NQE9 182 aaKnown RBP16.29■□□□□ 0.2
NDEL1-209ENST00000580738 POFUT2Q9Y2G5 429 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 CACNG2Q9Y698 323 aa16.29■□□□□ 0.2
NDEL1-209ENST00000580738 IGHV1-69-2A0A0G2JMI3 117 aa16.28■□□□□ 0.2
NDEL1-209ENST00000580738 LOC102725191A0A1B0GVB3 256 aa16.28■□□□□ 0.2
NDEL1-209ENST00000580738 TLDC2A0PJX2 215 aa16.28■□□□□ 0.2
NDEL1-209ENST00000580738 MS4A18H0YCH9 400 aa16.28■□□□□ 0.2
NDEL1-209ENST00000580738 NUDT17P0C025 328 aa16.28■□□□□ 0.2
NDEL1-209ENST00000580738 PRTN3P24158 256 aa16.28■□□□□ 0.2
NDEL1-209ENST00000580738 RAD52P43351 418 aa16.28■□□□□ 0.2
NDEL1-209ENST00000580738 CLNS1AP54105 237 aaKnown RBP16.28■□□□□ 0.2
NDEL1-209ENST00000580738 TXNL4AP83876 142 aaKnown RBP16.28■□□□□ 0.2
NDEL1-209ENST00000580738 DPY19L1Q2PZI1 675 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms