RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ACTRT3Q9BYD9 372 aa11.72□□□□□ -0.53
CSNK1D-213ENST00000580446 SLC7A8Q9UHI5 535 aa11.72□□□□□ -0.53
CSNK1D-213ENST00000580446 GPR160Q9UJ42 338 aa11.72□□□□□ -0.53
CSNK1D-213ENST00000580446 PCDHGB4Q9UN71 923 aa11.72□□□□□ -0.53
CSNK1D-213ENST00000580446 A0A0U1RQK1 487 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 A8MT66 165 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 F5H0A9 414 aaPredicted RBP11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 RPL36A-HNRNPH2H7BZ11 118 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 RAB36O95755 333 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 GPIP06744 558 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 GSTM5P46439 218 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 SELENOVP59797 346 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 RPL15P61313 204 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 RAB1AP62820 205 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 MRPS25P82663 173 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 RBBP4Q09028 425 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 ZNF141Q15928 474 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 UNC50Q53HI1 259 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 SPATA46Q5T0L3 261 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 ZNF813Q6ZN06 617 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 C1orf122Q6ZSJ8 110 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 KLHL7Q8IXQ5 586 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 PDZD9Q8IXQ8 264 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 CMIPQ8IY22 773 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 R3HDM4Q96D70 268 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 TSSK3Q96PN8 268 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 GPATCH2Q9NW75 528 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 SLCO1C1Q9NYB5 712 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 FAF1Q9UNN5 650 aaPredicted RBP11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 RYR1P21817 5038 aa11.71□□□□□ -0.53
CSNK1D-213ENST00000580446 CEACAM18A8MTB9 384 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 ZNF99A8MXY4 864 aaPredicted RBP11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 TM9SF1O15321 606 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 MGRN1O60291 552 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 URI1O94763 535 aaPredicted RBP11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 SUPT7LO94864 414 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 PPIAL4GP0DN37 164 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 ZNF250P15622 560 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 DRD4P21917 467 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 LSP1P33241 339 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 RPL4P36578 427 aaKnown RBP11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 IER3P46695 156 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 POLR2HP52434 150 aaKnown RBP11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 CHI3L2Q15782 390 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 UAP1Q16222 522 aaPredicted RBP11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 IMPG1Q17R60 797 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 SPDYE7PQ495Y7 208 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 SLC35E4Q6ICL7 350 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 CLEC4FQ8N1N0 589 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 FAM71CQ8NEG0 241 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 MUC7Q8TAX7 377 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 CNOT9Q92600 299 aaKnown RBP11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 CCDC126Q96EE4 140 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 RHOXF2Q9BQY4 288 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 SSBP3Q9BWW4 388 aaPredicted RBP11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 SIRT5Q9NXA8 310 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 BAIAP2L1Q9UHR4 511 aa11.7□□□□□ -0.54
CSNK1D-213ENST00000580446 ZNF208O43345 1280 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 SBK3P0C264 359 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 HOXD3P31249 432 aaPredicted RBP11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 MPV17P39210 176 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 GUCY2DQ02846 1103 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 SLC3A1Q07837 685 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 MEPCEQ7L2J0 689 aaKnown RBP11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 PIP4P2Q8N4L2 257 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 KLHDC1Q8N7A1 406 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 OR4S1Q8NGB4 309 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 RAB40AQ8WXH6 277 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 DACT3Q96B18 629 aaPredicted RBP11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 ZG16BQ96DA0 208 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 ZNF382Q96SR6 550 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 LYSTQ99698 3801 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 CDADC1Q9BWV3 514 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 SEMA6AQ9H2E6 1030 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 CNTD2Q9H8S5 307 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 SNX24Q9Y343 169 aa11.69□□□□□ -0.54
CSNK1D-213ENST00000580446 NPIPB8E9PQR5 432 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 TNFRSF13BO14836 293 aaPredicted RBP11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 TSPAN9O75954 239 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 VSIG10L2P0DP72 767 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 GABRA5P31644 462 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 FRKP42685 505 aaPredicted RBP11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 CCT3P49368 545 aaKnown RBP11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 BTG1P62324 171 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 MFSD13AQ14CX5 517 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 TEX35Q5T0J7 233 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 CLEC6AQ6EIG7 209 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 ZNF774Q6NX45 483 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 GDPGP1Q6ZNW5 385 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 LRRC28Q86X40 367 aaPredicted RBP11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 ARFGAP2Q8N6H7 521 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 C11orf40Q8WZ69 217 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 CFHR4Q92496 578 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 PMM1Q92871 262 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 TMEM237Q96Q45 408 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 OR2M2Q96R28 347 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 NUDT16L1Q9BRJ7 211 aaKnown RBP11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 IQCGQ9H095 443 aaKnown RBP11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 REEP4Q9H6H4 257 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms