RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 BPESC1Q9GZL8 116 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 NELFAQ9H3P2 528 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 NARFLQ9H6Q4 476 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 LPAR2Q9HBW0 351 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 SLC52A3Q9NQ40 469 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 EXOSC3Q9NQT5 275 aaKnown RBP3.33□□□□□ -1.88
NUP85-209ENST00000578987 POLE3Q9NRF9 147 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 CA10Q9NS85 328 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 TMEM160Q9NX00 188 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 LPAR3Q9UBY5 353 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 MALT1Q9UDY8 824 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 TMEFF2Q9UIK5 374 aaPredicted RBP3.33□□□□□ -1.88
NUP85-209ENST00000578987 FZR1Q9UM11 496 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 SLC9A8Q9Y2E8 581 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 POLR3KQ9Y2Y1 108 aaPredicted RBP3.33□□□□□ -1.88
NUP85-209ENST00000578987 CHST2Q9Y4C5 530 aa3.33□□□□□ -1.88
NUP85-209ENST00000578987 A0A1W2PRQ8 180 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 CDHR4A6H8M9 788 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 OR6C65A6NJZ3 312 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 A8MVM7 634 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 B9A039 149 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 ZNF587BE7ETH6 402 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 E9PBE3 544 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 MS4A18H0YCH9 400 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 J3KRW8 73 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 M0R3G1 203 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 DNPH1O43598 174 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 ANP32DO95626 131 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 DBIP07108 87 aaKnown RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 GUSBP08236 651 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 TFPTP0C1Z6 253 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 ZCCHC18P0CG32 403 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 PNMTP11086 282 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 CD79AP11912 226 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 HLA-DOBP13765 273 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 IFNGR1P15260 489 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 ITGA2P17301 1181 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 RPS4Y1P22090 263 aaKnown RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 FKBP2P26885 142 aaKnown RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 SRP14P37108 136 aaKnown RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 RBMXP38159 391 aaKnown RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 CAPZA2P47755 286 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 IDH3GP51553 393 aaPredicted RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 POLR2JP52435 117 aaKnown RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 MVDP53602 400 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 SNRPD2P62316 118 aaKnown RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 TXNL4AP83876 142 aaKnown RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 HPCAP84074 193 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 NPRL3Q12980 569 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 SQLEQ14534 574 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 CEACAM16Q2WEN9 425 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 MS4A18Q3C1V0 323 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 GLIPR1L2Q4G1C9 344 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 ZNF311Q5JNZ3 666 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 GKAP1Q5VSY0 366 aaPredicted RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 C1orf140Q5VVS0 124 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 FAM91A1Q658Y4 838 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 WBP2NLQ6ICG8 309 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 C16orf54Q6UWD8 224 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 SSX8Q7RTT4 187 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 ABHD12BQ7Z5M8 362 aaPredicted RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 SERPINA11Q86U17 422 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 MDP1Q86V88 176 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 COMTD1Q86VU5 262 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 LRP11Q86VZ4 500 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 FUNDC1Q8IVP5 155 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 CMIPQ8IY22 773 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 GPR137CQ8N3F9 429 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 C17orf78Q8N4C9 275 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 TRIML2Q8N7C3 387 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 C1orf162Q8NEQ5 155 aaPredicted RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 RP9Q8TA86 221 aaKnown RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 FGFBP3Q8TAT2 258 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 UBASH3BQ8TF42 649 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 SLC38A5Q8WUX1 472 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 C10orf82Q8WW14 230 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 TAAR8Q969N4 342 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 VPS33AQ96AX1 596 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 TMEM45BQ96B21 275 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 KTI12Q96EK9 354 aaPredicted RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 THOC1Q96FV9 657 aaKnown RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 TXNDC15Q96J42 360 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 HSH2DQ96JZ2 352 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 CCDC115Q96NT0 180 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 TRNT1Q96Q11 434 aaKnown RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 ALKBH3Q96Q83 286 aaPredicted RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 SYT3Q9BQG1 590 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 WFDC6Q9BQY6 131 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 SF3B5Q9BWJ5 86 aaKnown RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 RAB1BQ9H0U4 201 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 OR51B6Q9H340 312 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 PLK3Q9H4B4 646 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 ZNF385DQ9H6B1 395 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 RMND5AQ9H871 391 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 NOX3Q9HBY0 568 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 CRLF2Q9HC73 371 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 GPR35Q9HC97 309 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 SAR1AQ9NR31 198 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 BTNL2Q9UIR0 455 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 PCDHB10Q9UN67 800 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms