RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 FOXC2Q99958 501 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 PCDHAC1Q9H158 963 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 CXorf56Q9H5V9 222 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 FKRPQ9H9S5 495 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 CRLF2Q9HC73 371 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 SLC17A5Q9NRA2 495 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 BEX4Q9NWD9 120 aaPredicted RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 CISD1Q9NZ45 108 aaKnown RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 GMPR2Q9P2T1 348 aaKnown RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 RHCGQ9UBD6 479 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 ZNF229Q9UJW7 825 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 MGAT4BQ9UQ53 548 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 LAMP3Q9UQV4 416 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 POFUT2Q9Y2G5 429 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 AMDHD2Q9Y303 409 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 ATP23Q9Y6H3 246 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 ARHGAP21Q5T5U3 1957 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 HCFC1P51610 2035 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 HEATR5AQ86XA9 2040 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 A0A1W2PPR1 153 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 VSTM5A8MXK1 200 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 B2RBV5 119 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 ENTPD5O75356 428 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 STAMBPO95630 424 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 FAM107AO95990 144 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 HPRP00739 348 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 CRYAAP02489 173 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 THY1P04216 161 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 CD79AP11912 226 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 BMP4P12644 408 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 IFI30P13284 250 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 HLA-DOBP13765 273 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 CD99P14209 185 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 ITGA2P17301 1181 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 CD53P19397 219 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 CD40P25942 277 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 MSX2P35548 267 aaPredicted RBP5.75□□□□□ -1.49
TRAF4-213ENST00000578917 GUCA1AP43080 201 aaPredicted RBP5.75□□□□□ -1.49
TRAF4-213ENST00000578917 CSNK1A1P48729 337 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 FABP6P51161 128 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 CRYBA2P53672 197 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 CDH11P55287 796 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 CLRN1P58418 232 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 SLC25A3Q00325 362 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 LAPTM4AQ15012 233 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 ZNF74Q16587 644 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 CEACAM16Q2WEN9 425 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 TBRG1Q3YBR2 411 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 ZNF672Q499Z4 452 aaPredicted RBP5.75□□□□□ -1.49
TRAF4-213ENST00000578917 FGD3Q5JSP0 725 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 SPNS3Q6ZMD2 512 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 ZNF730Q6ZMV8 503 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 WDR88Q6ZMY6 472 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 SLC35D2Q76EJ3 337 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 NKAIN4Q8IVV8 208 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 CCDC36Q8IYA8 594 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 DEFB107AQ8IZN7 70 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 FBXL14Q8N1E6 418 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 ZNF611Q8N823 705 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 FAM156AQ8NDB6 213 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 OR1K1Q8NGR3 316 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 ZNF566Q969W8 418 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 BPIFA2Q96DR5 249 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 TRMT61AQ96FX7 289 aaKnown RBP5.75□□□□□ -1.49
TRAF4-213ENST00000578917 PERPQ96FX8 193 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 HSH2DQ96JZ2 352 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 LRR1Q96L50 414 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 ADAD1Q96M93 576 aaKnown RBP5.75□□□□□ -1.49
TRAF4-213ENST00000578917 ULBP2Q9BZM5 246 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 LINC00470Q9BZP3 86 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 AMBRA1Q9C0C7 1298 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 GPR35Q9HC97 309 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 MOV10Q9HCE1 1003 aaKnown RBP5.75□□□□□ -1.49
TRAF4-213ENST00000578917 OBP2BQ9NPH6 170 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 ARL8BQ9NVJ2 186 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 MED29Q9NX70 200 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 B3GAT1Q9P2W7 334 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 SAMD4AQ9UPU9 718 aaKnown RBP5.75□□□□□ -1.49
TRAF4-213ENST00000578917 SNX13Q9Y5W8 968 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 SLC25A15Q9Y619 301 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 V9GYQ6 96 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 F8P00451 2351 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 CSMD1Q96PZ7 3565 aa5.75□□□□□ -1.49
TRAF4-213ENST00000578917 FLNAP21333 2647 aaKnown RBP5.74□□□□□ -1.49
TRAF4-213ENST00000578917 NBPF19A0A087WUL8 3843 aa5.74□□□□□ -1.49
TRAF4-213ENST00000578917 HTR3EA5X5Y0 456 aa5.74□□□□□ -1.49
TRAF4-213ENST00000578917 EFCAB9A8MZ26 197 aa5.74□□□□□ -1.49
TRAF4-213ENST00000578917 PDLIM1O00151 329 aa5.74□□□□□ -1.49
TRAF4-213ENST00000578917 TRAF3IP2O43734 574 aaPredicted RBP5.74□□□□□ -1.49
TRAF4-213ENST00000578917 SEC14L2O76054 403 aa5.74□□□□□ -1.49
TRAF4-213ENST00000578917 OR7A10O76100 309 aa5.74□□□□□ -1.49
TRAF4-213ENST00000578917 ZNF432O94892 652 aa5.74□□□□□ -1.49
TRAF4-213ENST00000578917 LYPD3O95274 346 aa5.74□□□□□ -1.49
TRAF4-213ENST00000578917 IGHG1P01857 330 aa5.74□□□□□ -1.49
TRAF4-213ENST00000578917 F13BP05160 661 aa5.74□□□□□ -1.49
TRAF4-213ENST00000578917 HOXB1P14653 301 aaPredicted RBP5.74□□□□□ -1.49
TRAF4-213ENST00000578917 PAX7P23759 505 aa5.74□□□□□ -1.49
TRAF4-213ENST00000578917 RPL4P36578 427 aaKnown RBP5.74□□□□□ -1.49
TRAF4-213ENST00000578917 AQP2P41181 271 aa5.74□□□□□ -1.49
TRAF4-213ENST00000578917 DAP3P51398 398 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms