RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 RENP00797 406 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 IGHMP01871 453 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 OPN1LWP04000 364 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 F13BP05160 661 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 NR2C1P13056 603 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 EDN3P14138 238 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 PLA2G2AP14555 144 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 ZNF43P17038 809 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 EEF1B2P24534 225 aaKnown RBP12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 ACVR2AP27037 513 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 AGFG1P52594 562 aaKnown RBP12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 FXYD6P3P58550 94 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 RPL27P61353 136 aaKnown RBP12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 ERVK-25P63136 954 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 FOXK1P85037 733 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 TMED1Q13445 227 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 FHL1Q13642 323 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 TMEM201Q5SNT2 666 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 GTF2IRD2BQ6EKJ0 949 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 GFRALQ6UXV0 394 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 ADCK1Q86TW2 530 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 GTF2IRD2Q86UP8 949 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 PM20D2Q8IYS1 436 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 UBQLNLQ8IYU4 475 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 MOSPD2Q8NHP6 518 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 SARAFQ96BY9 339 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 IL4I1Q96RQ9 567 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 PLSCR2Q9NRY7 297 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 PLCXD1Q9NUJ7 323 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 ZNF226Q9NYT6 803 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 SPRR3Q9UBC9 169 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 SCOCQ9UIL1 159 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 MCTS1Q9ULC4 181 aaKnown RBP12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 A0A1B0GTH9 108 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 A0A1B0GVC2 190 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 EFCAB10A6NFE3 127 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 SLC1A7O00341 560 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 AQP7O14520 342 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 AHCYL1O43865 530 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 PRKYO43930 277 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 MRPS14O60783 128 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 WISP1O95388 367 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 LYNP07948 512 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 ZNF708P17019 499 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 EIF1AXP47813 144 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 GABARAPL2P60520 117 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 TLE1Q04724 770 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 SLC35F1Q5T1Q4 408 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 ARMC4Q5T2S8 1044 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 NXNL2Q5VZ03 156 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 VASNQ6EMK4 673 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 CXXC5Q7LFL8 322 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 TMEM99Q8N816 258 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 LRRC75AQ8NAA5 344 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 BPIFB6Q8NFQ5 453 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 OR52E2Q8NGJ4 325 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 CNIH3Q8TBE1 160 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 FNDC8Q8TC99 324 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 MYDGFQ969H8 173 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 OTULINQ96BN8 352 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 DNAJA3Q96EY1 480 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 LRR1Q96L50 414 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 SNX18Q96RF0 628 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 SF3B5Q9BWJ5 86 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 ZNF696Q9H7X3 374 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 VCX3AQ9NNX9 186 aa12.46□□□□□ -0.41
CSNK1D-209ENST00000578904 GTF3C1Q12789 2109 aa12.46□□□□□ -0.42
CSNK1D-209ENST00000578904 KALRNO60229 2985 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 HELZ2Q9BYK8 2649 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 OR14I1A6ND48 311 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 NPIPA2E9PIF3 369 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 NPIPA3F8WFD2 350 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 MS4A18H0YCH9 400 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 PRODHO43272 600 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 CPN1P15169 458 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 GABRB1P18505 474 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 SHC1P29353 583 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 CENPAP49450 140 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 STARP49675 285 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 LHX2P50458 406 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 CLDN15P56746 228 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 CLDN20P56880 219 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 H3F3AP84243 136 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 RBPJQ06330 500 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 KRR1Q13601 381 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 POU4F3Q15319 338 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 CTU2Q2VPK5 515 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 MS4A18Q3C1V0 323 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 GXYLT1Q4G148 440 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 KLHL22Q53GT1 634 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 LCN1P1Q5VSP4 162 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 SLC35D2Q76EJ3 337 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 GPAT4Q86UL3 456 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 GGNQ86UU5 652 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 IGFN1Q86VF2 1251 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 CCDC71Q8IV32 467 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 ARIH2OSQ8N7S6 290 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 ZNF540Q8NDQ6 660 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 ST6GALNAC3Q8NDV1 305 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms