RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 NDUFAF4Q9P032 175 aa20.29■□□□□ 0.84
LIMD2-204ENST00000578297 SLC35F4A4IF30 521 aa20.28■□□□□ 0.84
LIMD2-204ENST00000578297 RNF13O43567 381 aa20.28■□□□□ 0.84
LIMD2-204ENST00000578297 ROR2Q01974 943 aaKnown RBP20.28■□□□□ 0.84
LIMD2-204ENST00000578297 HMBOX1Q6NT76 420 aa20.28■□□□□ 0.84
LIMD2-204ENST00000578297 NANOGNBQ7Z5D8 188 aa20.28■□□□□ 0.84
LIMD2-204ENST00000578297 RNF113BQ8IZP6 322 aaKnown RBP20.28■□□□□ 0.84
LIMD2-204ENST00000578297 GPR137CQ8N3F9 429 aa20.28■□□□□ 0.84
LIMD2-204ENST00000578297 WDR31Q8NA23 367 aa20.28■□□□□ 0.84
LIMD2-204ENST00000578297 OR52N5Q8NH56 324 aa20.28■□□□□ 0.84
LIMD2-204ENST00000578297 EMC6Q9BV81 110 aa20.28■□□□□ 0.84
LIMD2-204ENST00000578297 C1orf21Q9H246 121 aa20.28■□□□□ 0.84
LIMD2-204ENST00000578297 ANKRD19PQ9H560 264 aa20.28■□□□□ 0.84
LIMD2-204ENST00000578297 NMNAT1Q9HAN9 279 aaPredicted RBP20.28■□□□□ 0.84
LIMD2-204ENST00000578297 SLC17A5Q9NRA2 495 aa20.28■□□□□ 0.84
LIMD2-204ENST00000578297 OTOGQ6ZRI0 2925 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 ZNF726A6NNF4 738 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 BLOC1S5-TXNDC5H3BN57 136 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 PIP5K1CO60331 668 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 RAF1P04049 648 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 SEMG1P04279 462 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 TSPAN19P0C672 248 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 IFNGR1P15260 489 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 RHCEP18577 417 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 CDH2P19022 906 aaPredicted RBP20.27■□□□□ 0.84
LIMD2-204ENST00000578297 ZNF704Q6ZNC4 412 aaPredicted RBP20.27■□□□□ 0.84
LIMD2-204ENST00000578297 SLC35D2Q76EJ3 337 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 C20orf196Q8IYI0 205 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 ACOT11Q8WXI4 607 aaPredicted RBP20.27■□□□□ 0.84
LIMD2-204ENST00000578297 BPIFA2Q96DR5 249 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 ADAD1Q96M93 576 aaKnown RBP20.27■□□□□ 0.84
LIMD2-204ENST00000578297 GPR35Q9HC97 309 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 NPAP1Q9NZP6 1156 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 PLEKHA6Q9Y2H5 1048 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 AMDHD2Q9Y303 409 aa20.27■□□□□ 0.84
LIMD2-204ENST00000578297 FAM32AQ9Y421 112 aaKnown RBP20.27■□□□□ 0.84
LIMD2-204ENST00000578297 A0A087WUU8 490 aa20.26■□□□□ 0.83
LIMD2-204ENST00000578297 SERPINI2O75830 405 aa20.26■□□□□ 0.83
LIMD2-204ENST00000578297 IFI30P13284 250 aa20.26■□□□□ 0.83
LIMD2-204ENST00000578297 DNASE1P24855 282 aa20.26■□□□□ 0.83
LIMD2-204ENST00000578297 IST1P53990 364 aa20.26■□□□□ 0.83
LIMD2-204ENST00000578297 SH3BGRP55822 239 aaPredicted RBP20.26■□□□□ 0.83
LIMD2-204ENST00000578297 LSM11P83369 360 aaKnown RBP eCLIP20.26■□□□□ 0.83
LIMD2-204ENST00000578297 VLDLRP98155 873 aa20.26■□□□□ 0.83
LIMD2-204ENST00000578297 RPL18Q07020 188 aaKnown RBP20.26■□□□□ 0.83
LIMD2-204ENST00000578297 OR1K1Q8NGR3 316 aa20.26■□□□□ 0.83
LIMD2-204ENST00000578297 OR6X1Q8NH79 312 aa20.26■□□□□ 0.83
LIMD2-204ENST00000578297 CCM2LQ9NUG4 571 aaPredicted RBP20.26■□□□□ 0.83
LIMD2-204ENST00000578297 TAS2R1Q9NYW7 299 aa20.26■□□□□ 0.83
LIMD2-204ENST00000578297 ACTR3BQ9P1U1 418 aa20.26■□□□□ 0.83
LIMD2-204ENST00000578297 ITGB1BP2Q9UKP3 347 aa20.26■□□□□ 0.83
LIMD2-204ENST00000578297 PRPF19Q9UMS4 504 aaKnown RBP20.26■□□□□ 0.83
LIMD2-204ENST00000578297 ALPK2Q86TB3 2170 aa20.26■□□□□ 0.83
LIMD2-204ENST00000578297 A0A1W2PR80 420 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 A0A1W2PRQ8 180 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 DPRXA6NFQ7 191 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 ATE1O95260 518 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 PLAUP00749 431 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 CD3EP07766 207 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 ITGA2P17301 1181 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 HOXC12P31275 282 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 BIDP55957 195 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 PRKCDQ05655 676 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 BSPH1Q075Z2 132 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 CAMK2DQ13557 499 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 DGCR6Q14129 220 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 KEAP1Q14145 624 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 IQCCQ4KMZ1 466 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 PHYHD1Q5SRE7 291 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 CARD17Q5XLA6 110 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 ZNF730Q6ZMV8 503 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 MBOAT2Q6ZWT7 520 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 WDFY1Q8IWB7 410 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 NRMQ8IXM6 262 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 MAGEE2Q8TD90 523 aaPredicted RBP20.25■□□□□ 0.83
LIMD2-204ENST00000578297 BCL2L2Q92843 193 aaPredicted RBP20.25■□□□□ 0.83
LIMD2-204ENST00000578297 CRLF2Q9HC73 371 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 RNF115Q9Y4L5 304 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 V9GYQ6 96 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 CCDC168Q8NDH2 2452 aa20.25■□□□□ 0.83
LIMD2-204ENST00000578297 MYO9AB2RTY4 2548 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 hCG_2039718K7EN88 272 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 H1F0P07305 194 aaKnown RBP20.24■□□□□ 0.83
LIMD2-204ENST00000578297 AQP2P41181 271 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 PRPS1P60891 318 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 ACKR1Q16570 336 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 HIKESHIQ53FT3 197 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 ANKRD16Q6P6B7 361 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 KLHL17Q6TDP4 642 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 MBD6Q96DN6 1003 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 MUC13Q9H3R2 512 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 UBTD1Q9HAC8 227 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 OBP2BQ9NPH6 170 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 B3GAT2Q9NPZ5 323 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 HIF3AQ9Y2N7 669 aa20.24■□□□□ 0.83
LIMD2-204ENST00000578297 MAGED1Q9Y5V3 778 aaPredicted RBP20.24■□□□□ 0.83
LIMD2-204ENST00000578297 A0A1W2PRG6 482 aa20.23■□□□□ 0.83
LIMD2-204ENST00000578297 M0R3G1 203 aa20.23■□□□□ 0.83
LIMD2-204ENST00000578297 WNT11O96014 354 aa20.23■□□□□ 0.83
LIMD2-204ENST00000578297 HOXB1P14653 301 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms