RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 NUP214P35658 2090 aaPredicted RBP13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 WNK2Q9Y3S1 2297 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 ISPDA4D126 451 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 M0QZ24 198 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 RAB36O95755 333 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 CHRNGP07510 517 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 FGF4P08620 206 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 UQCRC2P22695 453 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 GTF2E2P29084 291 aaKnown RBP13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 COPZ1P61923 177 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 CHI3L2Q15782 390 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 TSTQ16762 297 aaKnown RBP13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 MMEL1Q495T6 779 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 KLF17Q5JT82 389 aaPredicted RBP13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 ATG16L1Q676U5 607 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 RGS7BPQ6MZT1 257 aaPredicted RBP13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 ZNF813Q6ZN06 617 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 ANKRD46Q86W74 232 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 KIR3DL3Q8N743 410 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 DEFB108BQ8NET1 73 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 ST7LQ8TDW4 575 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 SNX33Q8WV41 574 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 C3orf30Q96M34 536 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 OXGR1Q96P68 337 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 OR2M2Q96R28 347 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 MMP26Q9NRE1 261 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 PSMC3IPQ9P2W1 217 aaPredicted RBP13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 TESQ9UGI8 421 aaKnown RBP13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 AUP1Q9Y679 476 aa13.83□□□□□ -0.2
CTDNEP1-211ENST00000575783 CLDN34H7C241 214 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 AHSA1O95433 338 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 GPANK1O95872 356 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 FAM157BP0CG42 384 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 G6PDP11413 515 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 CHI3L1P36222 383 aaPredicted RBP13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 RPS5P46782 204 aaKnown RBP13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 CCT5P48643 541 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 RAB39AQ14964 217 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 WBP2NLQ6ICG8 309 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 BRICD5Q6PL45 260 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 ZNF572Q7Z3I7 529 aaPredicted RBP13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 JAZF1Q86VZ6 243 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 MFSD8Q8NHS3 518 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 MZB1Q8WU39 189 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 CCL17Q92583 94 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 UBE2FQ969M7 185 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 TRNT1Q96Q11 434 aaKnown RBP13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 MS4A7Q9GZW8 240 aaPredicted RBP13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 SLC38A1Q9H2H9 487 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 OR51B6Q9H340 312 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 MTHFD2LQ9H903 347 aaPredicted RBP13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 B3GAT1Q9P2W7 334 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 MARCOQ9UEW3 520 aaPredicted RBP13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 SLC7A8Q9UHI5 535 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 LEF1Q9UJU2 399 aaPredicted RBP13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 POFUT2Q9Y2G5 429 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 DSPPQ9NZW4 1301 aa13.82□□□□□ -0.2
CTDNEP1-211ENST00000575783 FTCDNL1E5RQL4 147 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 HMGN4O00479 90 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 RNASET2O00584 256 aaKnown RBP13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 C1QCP02747 245 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 ABHD2P08910 425 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 B4GALT1P15291 398 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 NCF2P19878 526 aaPredicted RBP13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 ECHS1P30084 290 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 ACAA2P42765 397 aaKnown RBP13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 KLF3P57682 345 aaPredicted RBP13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 XKR7Q5GH72 579 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 C16orf87Q6PH81 154 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 ZNF440Q8IYI8 595 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 SYNPRQ8TBG9 265 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 WFDC12Q8WWY7 111 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 GTF3AQ92664 365 aaKnown RBP13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 SAP30LQ9HAJ7 183 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 NKIRAS2Q9NYR9 191 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 PURGQ9UJV8 347 aaKnown RBP13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 MMP24Q9Y5R2 645 aa13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 SOX21Q9Y651 276 aaPredicted RBP13.81□□□□□ -0.2
CTDNEP1-211ENST00000575783 WNK1Q9H4A3 2382 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 IGHV3OR16-10A0A075B7F0 116 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 NPIPB7O75200 414 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 FOXH1O75593 365 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 LCKP06239 509 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 DBIP07108 87 aaKnown RBP13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 PATE4P0C8F1 98 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 CRHR1P34998 444 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 CLDN8P56748 225 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 ZNF154Q13106 437 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 MFSD13AQ14CX5 517 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 TMEM123Q8N131 208 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 STK35Q8TDR2 534 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 TUBGCP3Q96CW5 907 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 NEURL3Q96EH8 262 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 KTI12Q96EK9 354 aaPredicted RBP13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 EMC6Q9BV81 110 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 BEX1Q9HBH7 125 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 SLCO1C1Q9NYB5 712 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 ZNF224Q9NZL3 707 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 PYCARDQ9ULZ3 195 aa13.8□□□□□ -0.2
CTDNEP1-211ENST00000575783 PPIAL4EA0A075B759 164 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms