RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 CLEC18BQ6UXF7 455 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 ATG16L2Q8NAA4 619 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 CLEC18CQ8NCF0 446 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 FEVQ99581 238 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 NTN4Q9HB63 628 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 MED29Q9NX70 200 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 HELZ2Q9BYK8 2649 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 SLC35F4A4IF30 521 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 ARRDC5A6NEK1 342 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 G3V2T6 193 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 H0YHG0 523 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 H3BNX3 289 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 KLF4O43474 513 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 TRAF3IP2O43734 574 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 RRP9O43818 475 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 SLC43A1O75387 559 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 ADAP00813 363 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 CGAP01215 116 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 IGHV3-9P01782 118 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 RNF224P0DH78 156 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 PRKACGP22612 351 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 GSSP48637 474 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 DAP3P51398 398 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 BIDP55957 195 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 RPS4XP62701 263 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 TOP3AQ13472 1001 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 MELKQ14680 651 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 CDSNQ15517 529 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 CARD17Q5XLA6 110 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 ZNF770Q6IQ21 691 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 HMBOX1Q6NT76 420 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 RPL13AP3Q6NVV1 102 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 SMARCD3Q6STE5 483 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 TFAP2EQ6VUC0 442 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 BEND4Q6ZU67 534 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 HDDC2Q7Z4H3 204 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 IGFN1Q86VF2 1251 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 ZDHHC13Q8IUH4 622 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 SVOPLQ8N434 492 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 ZIC4Q8N9L1 334 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 FANK1Q8TC84 345 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 TXNDC15Q96J42 360 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 ADAD1Q96M93 576 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 GPA33Q99795 319 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 PKP2Q99959 881 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 EMC6Q9BV81 110 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 RBM24Q9BX46 236 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 DGCR6LQ9BY27 220 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 POLDIP3Q9BY77 421 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 MCCC2Q9HCC0 563 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 PRSS50Q9UI38 385 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 RCE1Q9Y256 329 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 SIGLEC7Q9Y286 467 aa12.86□□□□□ -0.35
NPLOC4-218ENST00000574964 OR6C65A6NJZ3 312 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 SAC3D1A6NKF1 404 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 A8MXE2 369 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 PTP4A3O75365 173 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 SLC6A6P31641 620 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 SELENOPP49908 381 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 COX10Q12887 443 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 CAMK2DQ13557 499 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 ACKR1Q16570 336 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 HS3ST5Q8IZT8 346 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 GPR137CQ8N3F9 429 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 POMGNT2Q8NAT1 580 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 OR52L1Q8NGH7 329 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 OR6N1Q8NGY5 312 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 RNASE6Q93091 150 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 SLCO5A1Q9H2Y9 848 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 OR52D1Q9H346 318 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 TXNIPQ9H3M7 391 aa12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 STX18Q9P2W9 335 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 FOXD3Q9UJU5 478 aaPredicted RBP12.85□□□□□ -0.35
NPLOC4-218ENST00000574964 USP9XQ93008 2570 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 PRSS44E7EML9 344 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 CD14P08571 375 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 TSPAN19P0C672 248 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 NTF4P34130 210 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 ACVR1BP36896 505 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 RPS6KA3P51812 740 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 ERVK-25P63136 954 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 FAPQ12884 760 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 RFX4Q33E94 735 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 TSPO2Q5TGU0 170 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 FBXW9Q5XUX1 488 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 DPY19L2P2Q6ZN68 376 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 RASSF6Q6ZTQ3 369 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 ABHD12BQ7Z5M8 362 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 PQLC1Q8N2U9 271 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 LRRC75AQ8NAA5 344 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 OR6X1Q8NH79 312 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 SAMD8Q96LT4 415 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 NIPSNAP1Q9BPW8 284 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 KATNB1Q9BVA0 655 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 IFT27Q9BW83 186 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 B3GAT2Q9NPZ5 323 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 TBC1D23Q9NUY8 699 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 ELOVL5Q9NYP7 299 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 JKAMPQ9P055 326 aa12.84□□□□□ -0.35
NPLOC4-218ENST00000574964 GRHPRQ9UBQ7 328 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms