RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 ARMC10Q8N2F6 343 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 ZNF676Q8N7Q3 588 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 C12orf76Q8N812 135 aaPredicted RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 OR13C2Q8NGS9 318 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 DOK4Q8TEW6 326 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 RAB40AQ8WXH6 277 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 HCAR1Q9BXC0 346 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 POFUT1Q9H488 388 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 CALML5Q9NZT1 146 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 USP36Q9P275 1121 aaKnown RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 DHCR7Q9UBM7 475 aaKnown RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 WDR45Q9Y484 360 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 FAM171A2A8MVW0 826 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 CD63P08962 238 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 CSF1P09603 554 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 MPIP34949 423 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 CTNNB1P35222 781 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 LTBQ06643 244 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 TMEM115Q12893 351 aaPredicted RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 ARSIQ5FYB1 569 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 C9orf50Q5SZB4 431 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 RNF44Q7L0R7 432 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 SLC29A4Q7RTT9 530 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 JAZF1Q86VZ6 243 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 SDR9C7Q8NEX9 313 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 OR56A3Q8NH54 315 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 TSEN15Q8WW01 171 aaKnown RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 INTS12Q96CB8 462 aaKnown RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 ZG16BQ96DA0 208 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 MICU1Q9BPX6 476 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 C20orf24Q9BUV8 137 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 OR2AG1Q9H205 316 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 RGCCQ9H4X1 137 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ZNF230Q9UIE0 474 aaPredicted RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 FBXL4Q9UKA2 621 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 MED31Q9Y3C7 131 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 SERTM1A2A2V5 107 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ELOA3DA6NLF2 546 aaPredicted RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 PLPP1O14494 284 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 BCL2L11O43521 198 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 OR2F2O95006 317 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 RNF224P0DH78 156 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 NME1P15531 152 aaKnown RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 OR2F1Q13607 317 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 DHCR24Q15392 516 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ELOA3BQ3SY89 546 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 C2orf27AQ580R0 203 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 FAM46CQ5VWP2 391 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 PARS2Q7L3T8 475 aaKnown RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 GDF7Q7Z4P5 450 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 LILRB2Q8N423 598 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 EID2Q8N6I1 236 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 RASGEF1AQ8N9B8 481 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ELOA3Q8NG57 546 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 CD300LFQ8TDQ1 290 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 TM4SF18Q96CE8 201 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ATG5Q9H1Y0 275 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 SYT4Q9H2B2 425 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 INPP5EQ9NRR6 644 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 SIDT1Q9NXL6 827 aaKnown RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 TINAGQ9UJW2 476 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 YBX2Q9Y2T7 364 aaKnown RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 LRP4O75096 1905 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 SPTBP11277 2137 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 A0A0G2JK05 382 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ANKRD20A5PA0PJZ0 165 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 M0QYG6 137 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 AK4P27144 223 aaPredicted RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 MAPK3P27361 379 aaPredicted RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 CEBPGP53567 150 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 TAS2R38P59533 333 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ACTA2P62736 377 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ACTG2P63267 376 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 FOXK2Q01167 660 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ZNF750Q32MQ0 723 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ZNF528Q3MIS6 628 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ZNF585AQ6P3V2 769 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 MBOAT2Q6ZWT7 520 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ZNF547Q8IVP9 402 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 RNF141Q8WVD5 230 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ZBTB8AQ96BR9 441 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 ZDHHC12Q96GR4 267 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 CNN2Q99439 309 aaKnown RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 GLIPR2Q9H4G4 154 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 APMAPQ9HDC9 416 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 FBXO4Q9UKT5 387 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 PCOLCE2Q9UKZ9 415 aa8.79□□□□□ -1
CCDC40-212ENST00000574799 GPR55Q9Y2T6 319 aaPredicted RBP8.79□□□□□ -1
CCDC40-212ENST00000574799 CDC42EP2O14613 210 aa8.78□□□□□ -1
CCDC40-212ENST00000574799 POP4O95707 220 aaKnown RBP8.78□□□□□ -1
CCDC40-212ENST00000574799 CYB5AP00167 134 aa8.78□□□□□ -1
CCDC40-212ENST00000574799 ASGR2P07307 311 aa8.78□□□□□ -1
CCDC40-212ENST00000574799 ELFN1P0C7U0 828 aa8.78□□□□□ -1
CCDC40-212ENST00000574799 DDX6P26196 483 aaKnown RBP eCLIP8.78□□□□□ -1
CCDC40-212ENST00000574799 ABCD3P28288 659 aa8.78□□□□□ -1
CCDC40-212ENST00000574799 GPR143P51810 404 aa8.78□□□□□ -1
CCDC40-212ENST00000574799 GUCA2AQ02747 115 aa8.78□□□□□ -1
CCDC40-212ENST00000574799 ZNF485Q8NCK3 441 aa8.78□□□□□ -1
CCDC40-212ENST00000574799 PPP1R1CQ8WVI7 109 aa8.78□□□□□ -1
CCDC40-212ENST00000574799 LURAP1Q96LR2 239 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms