RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 CBLN4Q9NTU7 201 aa15.08■□□□□ 0
SMG6-212ENST00000573153 FAIMQ9NVQ4 179 aa15.08■□□□□ 0
SMG6-212ENST00000573153 ARMCX1Q9P291 453 aa15.08■□□□□ 0
SMG6-212ENST00000573153 BAG5Q9UL15 447 aa15.08■□□□□ 0
SMG6-212ENST00000573153 NOX1Q9Y5S8 564 aa15.08■□□□□ 0
SMG6-212ENST00000573153 CPSF4LA6NMK7 179 aaKnown RBP15.07■□□□□ 0
SMG6-212ENST00000573153 PLPP3O14495 311 aa15.07■□□□□ 0
SMG6-212ENST00000573153 KRT33AO76009 404 aa15.07■□□□□ 0
SMG6-212ENST00000573153 IGF2P01344 180 aa15.07■□□□□ 0
SMG6-212ENST00000573153 IFNA14P01570 189 aa15.07■□□□□ 0
SMG6-212ENST00000573153 IGKV3-15P01624 115 aa15.07■□□□□ 0
SMG6-212ENST00000573153 CDH2P19022 906 aaPredicted RBP15.07■□□□□ 0
SMG6-212ENST00000573153 ROR2Q01974 943 aaKnown RBP15.07■□□□□ 0
SMG6-212ENST00000573153 PUDPQ08623 228 aa15.07■□□□□ 0
SMG6-212ENST00000573153 C1DQ13901 141 aaKnown RBP15.07■□□□□ 0
SMG6-212ENST00000573153 ETFDHQ16134 617 aa15.07■□□□□ 0
SMG6-212ENST00000573153 ZNF544Q6NX49 715 aa15.07■□□□□ 0
SMG6-212ENST00000573153 C8orf82Q6P1X6 216 aaPredicted RBP15.07■□□□□ 0
SMG6-212ENST00000573153 ANKRD16Q6P6B7 361 aa15.07■□□□□ 0
SMG6-212ENST00000573153 SLC22A25Q6T423 547 aa15.07■□□□□ 0
SMG6-212ENST00000573153 PXKQ7Z7A4 578 aa15.07■□□□□ 0
SMG6-212ENST00000573153 FAM169BQ8N8A8 192 aa15.07■□□□□ 0
SMG6-212ENST00000573153 MAPK1IP1LQ8NDC0 245 aa15.07■□□□□ 0
SMG6-212ENST00000573153 PROX1Q92786 737 aa15.07■□□□□ 0
SMG6-212ENST00000573153 RCN3Q96D15 328 aa15.07■□□□□ 0
SMG6-212ENST00000573153 TXNDC15Q96J42 360 aa15.07■□□□□ 0
SMG6-212ENST00000573153 LRR1Q96L50 414 aa15.07■□□□□ 0
SMG6-212ENST00000573153 ZNF75AQ96N20 296 aa15.07■□□□□ 0
SMG6-212ENST00000573153 CACNG6Q9BXT2 260 aa15.07■□□□□ 0
SMG6-212ENST00000573153 FKRPQ9H9S5 495 aa15.07■□□□□ 0
SMG6-212ENST00000573153 GPR35Q9HC97 309 aa15.07■□□□□ 0
SMG6-212ENST00000573153 ARFGEF3Q5TH69 2177 aa15.07■□□□□ 0
SMG6-212ENST00000573153 RNF223E7ERA6 249 aa15.06■□□□□ 0
SMG6-212ENST00000573153 H7C417 338 aa15.06■□□□□ 0
SMG6-212ENST00000573153 CELA3BP08861 270 aa15.06■□□□□ 0
SMG6-212ENST00000573153 COX4I1P13073 169 aa15.06■□□□□ 0
SMG6-212ENST00000573153 NQO1P15559 274 aaKnown RBP15.06■□□□□ 0
SMG6-212ENST00000573153 ARF1P84077 181 aaKnown RBP15.06■□□□□ 0
SMG6-212ENST00000573153 ZP4Q12836 540 aa15.06■□□□□ 0
SMG6-212ENST00000573153 ZNF74Q16587 644 aa15.06■□□□□ 0
SMG6-212ENST00000573153 SWI5Q1ZZU3 235 aa15.06■□□□□ 0
SMG6-212ENST00000573153 HMBOX1Q6NT76 420 aa15.06■□□□□ 0
SMG6-212ENST00000573153 KLHL24Q6TFL4 600 aa15.06■□□□□ 0
SMG6-212ENST00000573153 HACD2Q6Y1H2 254 aa15.06■□□□□ 0
SMG6-212ENST00000573153 CARM1Q86X55 608 aa15.06■□□□□ 0
SMG6-212ENST00000573153 UEVLDQ8IX04 471 aa15.06■□□□□ 0
SMG6-212ENST00000573153 MUC15Q8N387 334 aa15.06■□□□□ 0
SMG6-212ENST00000573153 PIK3C3Q8NEB9 887 aa15.06■□□□□ 0
SMG6-212ENST00000573153 OR2T12Q8NG77 320 aa15.06■□□□□ 0
SMG6-212ENST00000573153 OR5J2Q8NH18 312 aa15.06■□□□□ 0
SMG6-212ENST00000573153 VANGL1Q8TAA9 524 aaPredicted RBP15.06■□□□□ 0
SMG6-212ENST00000573153 RNF217Q8TC41 542 aa15.06■□□□□ 0
SMG6-212ENST00000573153 GTPBP3Q969Y2 492 aaKnown RBP15.06■□□□□ 0
SMG6-212ENST00000573153 TRMT61AQ96FX7 289 aaKnown RBP15.06■□□□□ 0
SMG6-212ENST00000573153 NOX3Q9HBY0 568 aa15.06■□□□□ 0
SMG6-212ENST00000573153 MED29Q9NX70 200 aa15.06■□□□□ 0
SMG6-212ENST00000573153 CMTM6Q9NX76 183 aa15.06■□□□□ 0
SMG6-212ENST00000573153 ZNF224Q9NZL3 707 aa15.06■□□□□ 0
SMG6-212ENST00000573153 SLC7A7Q9UM01 511 aa15.06■□□□□ 0
SMG6-212ENST00000573153 MOKQ9UQ07 419 aa15.06■□□□□ 0
SMG6-212ENST00000573153 A0A096LPE4 126 aa15.05■□□□□ -0
SMG6-212ENST00000573153 A0A1W2PPZ6 126 aa15.05■□□□□ -0
SMG6-212ENST00000573153 FAM171A2A8MVW0 826 aa15.05■□□□□ -0
SMG6-212ENST00000573153 OR5F1O95221 314 aa15.05■□□□□ -0
SMG6-212ENST00000573153 CECR9P0C854 216 aa15.05■□□□□ -0
SMG6-212ENST00000573153 CALCRP30988 508 aa15.05■□□□□ -0
SMG6-212ENST00000573153 KDELR2P33947 212 aa15.05■□□□□ -0
SMG6-212ENST00000573153 RBM34P42696 430 aaKnown RBP15.05■□□□□ -0
SMG6-212ENST00000573153 NAAAQ02083 359 aa15.05■□□□□ -0
SMG6-212ENST00000573153 PMS2P3Q13401 168 aa15.05■□□□□ -0
SMG6-212ENST00000573153 CEACAM16Q2WEN9 425 aa15.05■□□□□ -0
SMG6-212ENST00000573153 AGAP6Q5VW22 663 aa15.05■□□□□ -0
SMG6-212ENST00000573153 TTC33Q6PID6 262 aaPredicted RBP15.05■□□□□ -0
SMG6-212ENST00000573153 ZNF627Q7L945 461 aa15.05■□□□□ -0
SMG6-212ENST00000573153 SLC46A3Q7Z3Q1 461 aa15.05■□□□□ -0
SMG6-212ENST00000573153 PRIMA1Q86XR5 153 aa15.05■□□□□ -0
SMG6-212ENST00000573153 C20orf196Q8IYI0 205 aa15.05■□□□□ -0
SMG6-212ENST00000573153 MICU2Q8IYU8 434 aa15.05■□□□□ -0
SMG6-212ENST00000573153 DEPDC4Q8N2C3 294 aa15.05■□□□□ -0
SMG6-212ENST00000573153 POU5F2Q8N7G0 328 aa15.05■□□□□ -0
SMG6-212ENST00000573153 OR10H5Q8NGA6 315 aa15.05■□□□□ -0
SMG6-212ENST00000573153 HTRA1Q92743 480 aa15.05■□□□□ -0
SMG6-212ENST00000573153 SLC38A2Q96QD8 506 aa15.05■□□□□ -0
SMG6-212ENST00000573153 HOPXQ9BPY8 73 aaPredicted RBP15.05■□□□□ -0
SMG6-212ENST00000573153 EMC6Q9BV81 110 aa15.05■□□□□ -0
SMG6-212ENST00000573153 REG4Q9BYZ8 158 aa15.05■□□□□ -0
SMG6-212ENST00000573153 MYLK2Q9H1R3 596 aa15.05■□□□□ -0
SMG6-212ENST00000573153 GMPR2Q9P2T1 348 aaKnown RBP15.05■□□□□ -0
SMG6-212ENST00000573153 ZNF229Q9UJW7 825 aa15.05■□□□□ -0
SMG6-212ENST00000573153 IGHV4-30-2A0A087WSY4 118 aa15.04■□□□□ -0
SMG6-212ENST00000573153 ELOVL7A1L3X0 281 aa15.04■□□□□ -0
SMG6-212ENST00000573153 SEC14L2O76054 403 aa15.04■□□□□ -0
SMG6-212ENST00000573153 IGFBP1P08833 259 aaPredicted RBP15.04■□□□□ -0
SMG6-212ENST00000573153 ASAH2BP0C7U1 165 aa15.04■□□□□ -0
SMG6-212ENST00000573153 THRBP10828 461 aa15.04■□□□□ -0
SMG6-212ENST00000573153 TNFRSF1BP20333 461 aa15.04■□□□□ -0
SMG6-212ENST00000573153 FUT4P22083 530 aa15.04■□□□□ -0
SMG6-212ENST00000573153 POU3F1Q03052 451 aaPredicted RBP15.04■□□□□ -0
SMG6-212ENST00000573153 HGFACQ04756 655 aa15.04■□□□□ -0
SMG6-212ENST00000573153 CYBRD1Q53TN4 286 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms