RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 NPIPB13A6NJU9 1138 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 CD8B2A6NJW9 211 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 HSPB2A8KAH6 182 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 CENPBD1B2RD01 187 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 NPIPB4C9JG80 1138 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 BLOC1S5-TXNDC5H3BN57 136 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 NTN3O00634 580 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 GNB5O14775 395 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 RGS5O15539 181 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 LRRTM2O43300 516 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF208O43345 1280 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SUSD5O60279 629 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 TRIM3O75382 744 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SCRG1O75711 98 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 IGHMP01871 453 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 GYPBP06028 91 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 GSTP1P09211 210 aaKnown RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 CSF3P09919 207 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 UCHL1P09936 223 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SP9P0CG40 484 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 CD8BP10966 210 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 IL7P13232 177 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SPNP16150 400 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 NPR2P20594 1047 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 ITPKBP27987 946 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SHC1P29353 583 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 PYCR1P32322 319 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 EVI2BP34910 448 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 THBS2P35442 1172 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 APOBEC1P41238 236 aaKnown RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 RANBP1P43487 201 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SLC16A1P53985 500 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 RPS11P62280 158 aaKnown RBP eCLIP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 RPL18Q07020 188 aaKnown RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 MFSD13AQ14CX5 517 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 CDK5R1Q15078 307 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 QPRTQ15274 297 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 TOMM34Q15785 309 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 HSPB2Q16082 182 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SGCBQ16585 318 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 BAK1Q16611 211 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 CEP78Q5JTW2 689 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 WIPI1Q5MNZ9 446 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 HBMQ6B0K9 141 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 PWWP2BQ6NUJ5 590 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 FDX2Q6P4F2 183 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 LEG1Q6P5S2 330 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SLC23A3Q6PIS1 610 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 ARL9Q6T311 187 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 LANCL3Q6ZV70 420 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SSX6Q7RTT6 188 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 CPEB2Q7Z5Q1 589 aaKnown RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 TIGD4Q8IY51 512 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 PRR22Q8IZ63 422 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 OR8H2Q8N162 312 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 EID2Q8N6I1 236 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 C10orf53Q8N6V4 93 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SCAIQ8N9R8 606 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 GATSQ8NAP1 163 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SDR9C7Q8NEX9 313 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 OR2T4Q8NH00 348 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 OR5J2Q8NH18 312 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SNX33Q8WV41 574 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SNRNP27Q8WVK2 155 aaKnown RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 THAP4Q8WY91 577 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 PIGKQ92643 395 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 NTNG2Q96CW9 530 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SMIM19Q96E16 107 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 GAL3ST4Q96RP7 486 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 KCNJ15Q99712 375 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 KLHDC3Q9BQ90 382 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 PTDSS2Q9BVG9 487 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 POTEKPQ9BYX7 375 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 NRSN2Q9GZP1 204 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 GAREM1Q9H706 876 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 FANCFQ9NPI8 374 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 CYSLTR2Q9NS75 346 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 RXFP3Q9NSD7 469 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 RHBDL2Q9NX52 303 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 MRPL39Q9NYK5 338 aaKnown RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 NPAP1Q9NZP6 1156 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 VSX1Q9NZR4 365 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 ABRACLQ9P1F3 81 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 RABL2AQ9UBK7 228 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 GRHPRQ9UBQ7 328 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF346Q9UL40 294 aaKnown RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 TBC1D24Q9ULP9 559 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 RABL2BQ9UNT1 228 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 GRIP1Q9Y3R0 1128 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 B3GALT1Q9Y5Z6 326 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 FKBP7Q9Y680 259 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 TMEM14AQ9Y6G1 99 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 TNRC6BQ9UPQ9 1833 aaKnown RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 CEP192Q8TEP8 1941 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 SPAG17Q6Q759 2223 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 ARID1BQ8NFD5 2236 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-213ENST00000569687 TRBV2A0A0J9YWF9 115 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 TEX13CA0A0J9YWL9 993 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 A0A1W2PQ72 361 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 TMEM72A0PK05 275 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms