RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SMSP52788 366 aa20.86■□□□□ 0.93
RAB40C-212ENST00000569575 RAP1BP61224 184 aa20.86■□□□□ 0.93
RAB40C-212ENST00000569575 RAP1AP62834 184 aa20.86■□□□□ 0.93
RAB40C-212ENST00000569575 POU3F1Q03052 451 aaPredicted RBP20.86■□□□□ 0.93
RAB40C-212ENST00000569575 SLC35D2Q76EJ3 337 aa20.86■□□□□ 0.93
RAB40C-212ENST00000569575 OR6X1Q8NH79 312 aa20.86■□□□□ 0.93
RAB40C-212ENST00000569575 MAGEE2Q8TD90 523 aaPredicted RBP20.86■□□□□ 0.93
RAB40C-212ENST00000569575 ASB5Q8WWX0 329 aa20.86■□□□□ 0.93
RAB40C-212ENST00000569575 INTS12Q96CB8 462 aaKnown RBP20.86■□□□□ 0.93
RAB40C-212ENST00000569575 SEC14L4Q9UDX3 406 aa20.86■□□□□ 0.93
RAB40C-212ENST00000569575 SLC5A6Q9Y289 635 aa20.86■□□□□ 0.93
RAB40C-212ENST00000569575 NOSIPQ9Y314 301 aaKnown RBP20.86■□□□□ 0.93
RAB40C-212ENST00000569575 KALRNO60229 2985 aa20.86■□□□□ 0.93
RAB40C-212ENST00000569575 ZNF726A6NNF4 738 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 C11orf98E9PRG8 122 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 PDLIM1O00151 329 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 EI24O14681 340 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 TRAF3IP2O43734 574 aaPredicted RBP20.85■□□□□ 0.93
RAB40C-212ENST00000569575 RAMP1O60894 148 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 MRPL33O75394 65 aaKnown RBP20.85■□□□□ 0.93
RAB40C-212ENST00000569575 TXNDC12O95881 172 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 AGTR1P30556 359 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 CTXN1P60606 82 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 TUSC5Q8IXB3 177 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 OR2T33Q8NG76 320 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 MOSPD2Q8NHP6 518 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 LRR1Q96L50 414 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 PRRG3Q9BZD7 231 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 SMURF2Q9HAU4 748 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 PLSCR4Q9NRQ2 329 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 COQ3Q9NZJ6 369 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 GRHPRQ9UBQ7 328 aa20.85■□□□□ 0.93
RAB40C-212ENST00000569575 NKX1-2Q9UD57 310 aaPredicted RBP20.85■□□□□ 0.93
RAB40C-212ENST00000569575 TMEFF2Q9UIK5 374 aaPredicted RBP20.85■□□□□ 0.93
RAB40C-212ENST00000569575 H3BN98 237 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 DVL2O14641 736 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 CD8BP10966 210 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 CRISP1P54107 249 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 FXYD6P3P58550 94 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 RPL27P61353 136 aaKnown RBP20.84■□□□□ 0.93
RAB40C-212ENST00000569575 SLC27A4Q6P1M0 643 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 C3P1Q6ZMU1 363 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 MEX3DQ86XN8 651 aaKnown RBP20.84■□□□□ 0.93
RAB40C-212ENST00000569575 LNX2Q8N448 690 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 ZIC4Q8N9L1 334 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 SNX18Q96RF0 628 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 GABARAPL3Q9BY60 117 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 POLDIP3Q9BY77 421 aaKnown RBP20.84■□□□□ 0.93
RAB40C-212ENST00000569575 TBC1D23Q9NUY8 699 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 SH3BGRL2Q9UJC5 107 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 CFAP46Q8IYW2 2715 aa20.84■□□□□ 0.93
RAB40C-212ENST00000569575 SOCS2O14508 198 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 LRRTM2O43300 516 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 TP53P04637 393 aaPredicted RBP20.83■□□□□ 0.93
RAB40C-212ENST00000569575 HMGN1P05114 100 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 F13BP05160 661 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 IFNGR1P15260 489 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 ZNF26P17031 533 aaPredicted RBP20.83■□□□□ 0.93
RAB40C-212ENST00000569575 KLK2P20151 261 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 SDHAP31040 664 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 KIR2DL2P43627 348 aaPredicted RBP20.83■□□□□ 0.93
RAB40C-212ENST00000569575 GIPRP48546 466 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 PCYT1AP49585 367 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 ACKR1Q16570 336 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 SLC36A3Q495N2 470 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 AAED1Q7RTV5 226 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 ADCK1Q86TW2 530 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 KIF18BQ86Y91 864 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 KDM8Q8N371 416 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 MARVELD2Q8N4S9 558 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 ARIH2OSQ8N7S6 290 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 POMGNT2Q8NAT1 580 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 SLC25A44Q96H78 314 aaPredicted RBP20.83■□□□□ 0.93
RAB40C-212ENST00000569575 SAMD8Q96LT4 415 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 KATNB1Q9BVA0 655 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 IFT27Q9BW83 186 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 TSSK6Q9BXA6 273 aa20.83■□□□□ 0.93
RAB40C-212ENST00000569575 ERRFI1Q9UJM3 462 aaPredicted RBP20.83■□□□□ 0.93
RAB40C-212ENST00000569575 MCIDASD6RGH6 385 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 TNFSF13O75888 250 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 OR3A2P47893 321 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 CLDN17P56750 224 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 NPRL3Q12980 569 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 STK11Q15831 433 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 ARMC4Q5T2S8 1044 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 FAM122BQ7Z309 247 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 ABHD12BQ7Z5M8 362 aaPredicted RBP20.82■□□□□ 0.92
RAB40C-212ENST00000569575 APH1AQ96BI3 265 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 SLC29A1Q99808 456 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 LINC00470Q9BZP3 86 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 EGLN3Q9H6Z9 239 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 SLC25A19Q9HC21 320 aa20.82■□□□□ 0.92
RAB40C-212ENST00000569575 MYO7BQ6PIF6 2116 aa20.81■□□□□ 0.92
RAB40C-212ENST00000569575 A0A0G2JNJ9 132 aa20.81■□□□□ 0.92
RAB40C-212ENST00000569575 KDM4EB2RXH2 506 aaPredicted RBP20.81■□□□□ 0.92
RAB40C-212ENST00000569575 BHLHE40O14503 412 aa20.81■□□□□ 0.92
RAB40C-212ENST00000569575 XKRYO14609 159 aa20.81■□□□□ 0.92
RAB40C-212ENST00000569575 SLC43A1O75387 559 aa20.81■□□□□ 0.92
RAB40C-212ENST00000569575 ZNF432O94892 652 aa20.81■□□□□ 0.92
RAB40C-212ENST00000569575 HLA-DOBP13765 273 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms