RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 MED29Q9NX70 200 aa6.81□□□□□ -1.32
CDH3-209ENST00000569080 ZNF224Q9NZL3 707 aa6.81□□□□□ -1.32
CDH3-209ENST00000569080 SLC13A4Q9UKG4 626 aa6.81□□□□□ -1.32
CDH3-209ENST00000569080 MOKQ9UQ07 419 aa6.81□□□□□ -1.32
CDH3-209ENST00000569080 FBN1P35555 2871 aaKnown RBP6.81□□□□□ -1.32
CDH3-209ENST00000569080 ABCA1O95477 2261 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 IGHV4-30-2A0A087WSY4 118 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 A0A096LPE4 126 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 A0A1W2PPZ6 126 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 TRAPPC13A5PLN9 417 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 ZNF99A8MXY4 864 aaPredicted RBP6.8□□□□□ -1.32
CDH3-209ENST00000569080 FAM220BPB1ANY3 271 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 RNF223E7ERA6 249 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 PLPP3O14495 311 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 AKAP8O43823 692 aaKnown RBP6.8□□□□□ -1.32
CDH3-209ENST00000569080 SLC43A1O75387 559 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 KRT33AO76009 404 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 SEC14L2O76054 403 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 WNT11O96014 354 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 MT-ATP6P00846 226 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 NPPAP01160 153 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 ASAH2BP0C7U1 165 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 TNFRSF1BP20333 461 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 CALCRP30988 508 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 FABP6P51161 128 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 ARF1P84077 181 aaKnown RBP6.8□□□□□ -1.32
CDH3-209ENST00000569080 NAAAQ02083 359 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 SWI5Q1ZZU3 235 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 INTS11Q5TA45 600 aaKnown RBP6.8□□□□□ -1.32
CDH3-209ENST00000569080 HMBOX1Q6NT76 420 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 C8orf82Q6P1X6 216 aaPredicted RBP6.8□□□□□ -1.32
CDH3-209ENST00000569080 UEVLDQ8IX04 471 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 PIK3C3Q8NEB9 887 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 OR10H5Q8NGA6 315 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 HTRA1Q92743 480 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 TXNDC15Q96J42 360 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 ZNF75AQ96N20 296 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 EMC6Q9BV81 110 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 ASPNQ9BXN1 380 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 FKRPQ9H9S5 495 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 BARX1Q9HBU1 254 aaPredicted RBP6.8□□□□□ -1.32
CDH3-209ENST00000569080 CRLF2Q9HC73 371 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 MEPEQ9NQ76 525 aaPredicted RBP6.8□□□□□ -1.32
CDH3-209ENST00000569080 MRGBPQ9NV56 204 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 ARMCX1Q9P291 453 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 GMPR2Q9P2T1 348 aaKnown RBP6.8□□□□□ -1.32
CDH3-209ENST00000569080 POU2F3Q9UKI9 436 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 NOX1Q9Y5S8 564 aa6.8□□□□□ -1.32
CDH3-209ENST00000569080 IGHV2OR16-5A0A0B4J2B6 119 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 SLC35F4A4IF30 521 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 INAFM1C9JVW0 142 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 M0R3G1 203 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 SLC22A2O15244 555 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 PDE5AO76074 875 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 VIMP08670 466 aaKnown RBP6.79□□□□□ -1.32
CDH3-209ENST00000569080 TSPAN19P0C672 248 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 HOXB1P14653 301 aaPredicted RBP6.79□□□□□ -1.32
CDH3-209ENST00000569080 NQO1P15559 274 aaKnown RBP6.79□□□□□ -1.32
CDH3-209ENST00000569080 CBR1P16152 277 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 FUT4P22083 530 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 PAX7P23759 505 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 UGT2B15P54855 530 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 UBE2NP61088 152 aaKnown RBP6.79□□□□□ -1.32
CDH3-209ENST00000569080 HGFACQ04756 655 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 PMS2P3Q13401 168 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 C1DQ13901 141 aaKnown RBP6.79□□□□□ -1.32
CDH3-209ENST00000569080 CYLC2Q14093 348 aaPredicted RBP6.79□□□□□ -1.32
CDH3-209ENST00000569080 MAPRE2Q15555 327 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 ADIPOQQ15848 244 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 CARD17Q5XLA6 110 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 ERICH5Q6P6B1 374 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 PXKQ7Z7A4 578 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 CARM1Q86X55 608 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 FBXL14Q8N1E6 418 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 GPR137CQ8N3F9 429 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 LRRC17Q8N6Y2 441 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 ZNF525Q8N782 197 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 NUP37Q8NFH4 326 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 OR5J2Q8NH18 312 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 RNF217Q8TC41 542 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 RASSF5Q8WWW0 418 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 RCN3Q96D15 328 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 MPP4Q96JB8 637 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 LRR1Q96L50 414 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 HS6ST2Q96MM7 605 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 SEPHS2Q99611 448 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 SH3GL1Q99961 368 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 REG4Q9BYZ8 158 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 SLC19A3Q9BZV2 496 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 MOV10Q9HCE1 1003 aaKnown RBP6.79□□□□□ -1.32
CDH3-209ENST00000569080 MED4Q9NPJ6 270 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 CA10Q9NS85 328 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 CMTM6Q9NX76 183 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 B3GNT2Q9NY97 397 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 TAS2R5Q9NYW4 299 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 SELENONQ9NZV5 590 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 ZNF229Q9UJW7 825 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 SLC7A7Q9UM01 511 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 ATP23Q9Y6H3 246 aa6.79□□□□□ -1.32
CDH3-209ENST00000569080 CAPN7Q9Y6W3 813 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms