RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 NFKBIDQ8NI38 313 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 HPS1Q92902 700 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 ZNF607Q96SK3 696 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 CCDC28BQ9BUN5 200 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 BPESC1Q9GZL8 116 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 DENND2DQ9H6A0 471 aaPredicted RBP12.98□□□□□ -0.33
RNF40-209ENST00000566703 SEC61A2Q9H9S3 476 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 B3GAT2Q9NPZ5 323 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 TCF7L2Q9NQB0 619 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 B3GNT2Q9NY97 397 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 SEC14L4Q9UDX3 406 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 CORO2BQ9UQ03 480 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 POLR3GO15318 223 aaPredicted RBP12.97□□□□□ -0.33
RNF40-209ENST00000566703 TPST1O60507 370 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 SERPINB7O75635 380 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 TGFAP01135 160 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 CELA3BP08861 270 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 TACSTD2P09758 323 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 DAOP14920 347 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 SLC6A2P23975 617 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 SQLEQ14534 574 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 SWT1Q5T5J6 900 aaKnown RBP12.97□□□□□ -0.33
RNF40-209ENST00000566703 SPATA21Q7Z572 469 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 MDP1Q86V88 176 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 MSRB3Q8IXL7 192 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 UBASH3BQ8TF42 649 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 SPDL1Q96EA4 605 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 ZNF837Q96EG3 531 aaPredicted RBP12.97□□□□□ -0.33
RNF40-209ENST00000566703 TMEM43Q9BTV4 400 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 ASPNQ9BXN1 380 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 SLC52A3Q9NQ40 469 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 MRPL39Q9NYK5 338 aaKnown RBP12.97□□□□□ -0.33
RNF40-209ENST00000566703 SLC13A4Q9UKG4 626 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 CMAHPQ9Y471 501 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 NOX1Q9Y5S8 564 aa12.97□□□□□ -0.33
RNF40-209ENST00000566703 TRBV5-3A0A0A0MS03 114 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 ZNF726A6NNF4 738 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 EVPLLA8MZ36 301 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 M0R3G1 203 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 BGLAPP02818 100 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 NQO1P15559 274 aaKnown RBP12.96□□□□□ -0.33
RNF40-209ENST00000566703 NR4A1P22736 598 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 IDH3AP50213 366 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 CHN2P52757 468 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 RGS8P57771 180 aaPredicted RBP12.96□□□□□ -0.33
RNF40-209ENST00000566703 NCALDP61601 193 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 IL1RL1Q01638 556 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 NPRL3Q12980 569 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 DAG1Q14118 895 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 OR1Q1Q15612 314 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 KRTAP24-1Q3LI83 254 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 PAGE3Q5JUK9 113 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 PXKQ7Z7A4 578 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 MYPOPQ86VE0 399 aaPredicted RBP12.96□□□□□ -0.33
RNF40-209ENST00000566703 CKAP2Q8WWK9 683 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 CHODLQ9H9P2 273 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 VAPAQ9P0L0 249 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 SLAMF8Q9P0V8 285 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 POFUT2Q9Y2G5 429 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 SPEF1Q9Y4P9 236 aa12.96□□□□□ -0.33
RNF40-209ENST00000566703 A0A0B4J2E0 115 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 A0A1B0GX12 115 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 ZNF503-AS2A6NEH8 195 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 LILRA1O75019 489 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 ERLIN1O75477 346 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 MFN2O95140 757 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 HPRP00739 348 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 MT-ATP6P00846 226 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 IGFBP1P08833 259 aaPredicted RBP12.95□□□□□ -0.34
RNF40-209ENST00000566703 ZNF35P13682 527 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 CBLP22681 906 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 CAPZA2P47755 286 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 ATP4BP51164 291 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 PMS2P3Q13401 168 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 SCARB2Q14108 478 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 ADRM1Q16186 407 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 GSG1Q2KHT4 349 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 GLIPR1L2Q4G1C9 344 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 PHYHD1Q5SRE7 291 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 LIPNQ5VXI9 398 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 COMTD1Q86VU5 262 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 RANBP3LQ86VV4 465 aaPredicted RBP12.95□□□□□ -0.34
RNF40-209ENST00000566703 C10orf111Q8N326 155 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 SVOPLQ8N434 492 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 HIPK4Q8NE63 616 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 C1orf159Q96HA4 380 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 ZNF75AQ96N20 296 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 EMC6Q9BV81 110 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 MS4A5Q9H3V2 200 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 NOX3Q9HBY0 568 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 DYNLRB1Q9NP97 96 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 CCDC167Q9P0B6 97 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 FBXL3Q9UKT7 428 aa12.95□□□□□ -0.34
RNF40-209ENST00000566703 PLPP3O14495 311 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 TPST2O60704 377 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 FMO6PO60774 539 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 HLA-HP01893 362 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 C8BP07358 591 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 HLA-DOBP13765 273 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 GLRXP35754 106 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms