RNA–Protein interactions for RNA: ENST00000565954.1

CCDC187-202, Transcript of coiled-coil domain containing 187, humanhuman

TSL 2

Gene CCDC187, Length 1,802 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-202ENST00000565954 Q96MT0 163 aa17.14■□□□□ 0.33
CCDC187-202ENST00000565954 NAA11Q9BSU3 229 aaPredicted RBP17.14■□□□□ 0.33
CCDC187-202ENST00000565954 TXNIPQ9H3M7 391 aa17.14■□□□□ 0.33
CCDC187-202ENST00000565954 FN3KQ9H479 309 aa17.14■□□□□ 0.33
CCDC187-202ENST00000565954 ZNF696Q9H7X3 374 aa17.14■□□□□ 0.33
CCDC187-202ENST00000565954 MED29Q9NX70 200 aa17.14■□□□□ 0.33
CCDC187-202ENST00000565954 KLHL21Q9UJP4 597 aa17.14■□□□□ 0.33
CCDC187-202ENST00000565954 PRR23D1E9PI22 279 aaPredicted RBP17.13■□□□□ 0.33
CCDC187-202ENST00000565954 H7C1C5 153 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 SMAD9O15198 467 aaKnown RBP17.13■□□□□ 0.33
CCDC187-202ENST00000565954 PRR23D2P0DMB1 279 aaPredicted RBP17.13■□□□□ 0.33
CCDC187-202ENST00000565954 ACVR2AP27037 513 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 ACVR1BP36896 505 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 AGFG1P52594 562 aaKnown RBP17.13■□□□□ 0.33
CCDC187-202ENST00000565954 CXCR4P61073 352 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 LCN6P62502 163 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 KRR1Q13601 381 aaKnown RBP17.13■□□□□ 0.33
CCDC187-202ENST00000565954 GPR139Q6DWJ6 353 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 RPUSD3Q6P087 351 aaKnown RBP17.13■□□□□ 0.33
CCDC187-202ENST00000565954 LEG1Q6P5S2 330 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 PLXDC2Q6UX71 529 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 JAZF1Q86VZ6 243 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 SIAH3Q8IW03 269 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 UEVLDQ8IX04 471 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 NPEPL1Q8NDH3 523 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 PTP4A1Q93096 173 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 TXNDC15Q96J42 360 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 YTHDF1Q9BYJ9 559 aaKnown RBP17.13■□□□□ 0.33
CCDC187-202ENST00000565954 ZMIZ1Q9ULJ6 1067 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 BSNQ9UPA5 3926 aa17.13■□□□□ 0.33
CCDC187-202ENST00000565954 ARHGEF9O43307 516 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 TXNDC12O95881 172 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 CCDC159P0C7I6 412 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 CLUP10909 449 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 TEKQ02763 1124 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 PIGFQ07326 219 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 C1DQ13901 141 aaKnown RBP17.12■□□□□ 0.33
CCDC187-202ENST00000565954 BCL2A1Q16548 175 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 ZNF239Q16600 458 aaKnown RBP17.12■□□□□ 0.33
CCDC187-202ENST00000565954 SLC25A30Q5SVS4 291 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 AADACL4Q5VUY2 407 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 MEDAGQ5VYS4 303 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 SLC35D2Q76EJ3 337 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 WDFY1Q8IWB7 410 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 ARIH2OSQ8N7S6 290 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 ZNF540Q8NDQ6 660 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 OR9Q1Q8NGQ5 310 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 ZNF566Q969W8 418 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 OXGR1Q96P68 337 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 PRORYQ9H606 182 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 FANCFQ9NPI8 374 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 TIGARQ9NQ88 270 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 PAK1IP1Q9NWT1 392 aaPredicted RBP17.12■□□□□ 0.33
CCDC187-202ENST00000565954 SCN3BQ9NY72 215 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 NOX1Q9Y5S8 564 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 SH3D21A4FU49 640 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 OR6C68A6NDL8 312 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 KDM4EB2RXH2 506 aaPredicted RBP17.12■□□□□ 0.33
CCDC187-202ENST00000565954 DNPH1O43598 174 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 BCL10O95999 233 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 IGHMP01871 453 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 GYPBP06028 91 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 ZNF43P17038 809 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 PAICSP22234 425 aaKnown RBP17.12■□□□□ 0.33
CCDC187-202ENST00000565954 KCTD21Q4G0X4 260 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 KLHL12Q53G59 568 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 EMC4Q5J8M3 183 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 ZNF519Q8TB69 540 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 CPNE4Q96A23 557 aaPredicted RBP17.12■□□□□ 0.33
CCDC187-202ENST00000565954 PNPLA2Q96AD5 504 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 EMC6Q9BV81 110 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 OR51V1Q9H2C8 321 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 H2AFY2Q9P0M6 372 aaPredicted RBP17.12■□□□□ 0.33
CCDC187-202ENST00000565954 BLOC1S6Q9UL45 172 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 CAMK2AQ9UQM7 478 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 RASD1Q9Y272 281 aa17.12■□□□□ 0.33
CCDC187-202ENST00000565954 MAP1BP46821 2468 aaKnown RBP17.11■□□□□ 0.33
CCDC187-202ENST00000565954 XKRYO14609 159 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 DAP3P51398 398 aaKnown RBP17.11■□□□□ 0.33
CCDC187-202ENST00000565954 RPS3AP61247 264 aaKnown RBP17.11■□□□□ 0.33
CCDC187-202ENST00000565954 RUNX1T1Q06455 604 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 INAQ16352 499 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 ARMC4Q5T2S8 1044 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 NXNL2Q5VZ03 156 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 C19orf48Q6RUI8 117 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 B3GLCTQ6Y288 498 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 AHSA2Q719I0 299 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 TSPAN14Q8NG11 270 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 WDYHV1Q96HA8 205 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 PLCXD1Q9NUJ7 323 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 TUBD1Q9UJT1 453 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 TPRKBQ9Y3C4 175 aa17.11■□□□□ 0.33
CCDC187-202ENST00000565954 PRODHO43272 600 aa17.1■□□□□ 0.33
CCDC187-202ENST00000565954 SLC16A1P53985 500 aa17.1■□□□□ 0.33
CCDC187-202ENST00000565954 CDH11P55287 796 aa17.1■□□□□ 0.33
CCDC187-202ENST00000565954 BIDP55957 195 aa17.1■□□□□ 0.33
CCDC187-202ENST00000565954 CSNK2BP67870 215 aa17.1■□□□□ 0.33
CCDC187-202ENST00000565954 ZNF91Q05481 1191 aa17.1■□□□□ 0.33
CCDC187-202ENST00000565954 EEF1A1P5Q5VTE0 462 aa17.1■□□□□ 0.33
CCDC187-202ENST00000565954 NHLRC1Q6VVB1 395 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms