RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 RIPPLY3P57055 190 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 CARD18P57730 90 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 CTXN1P60606 82 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 RAC3P60763 192 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 RPS3AP61247 264 aaKnown RBP9.91□□□□□ -0.82
SF3B3-205ENST00000564899 ISL1P61371 349 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 ERVK-25P63136 954 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 SRYQ05066 204 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 CD47Q08722 323 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 ZP4Q12836 540 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 TOP3AQ13472 1001 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-205ENST00000564899 MAD2L1BPQ15013 274 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-205ENST00000564899 SLC35F1Q5T1Q4 408 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 VASNQ6EMK4 673 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 FAM180AQ6UWF9 173 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 PTCHD4Q6ZW05 846 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 TMEM99Q8N816 258 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 UBE2FQ969M7 185 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 ERMAPQ96PL5 475 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-205ENST00000564899 IL4I1Q96RQ9 567 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 NAA11Q9BSU3 229 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-205ENST00000564899 NRIP3Q9NQ35 241 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 TIGARQ9NQ88 270 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 RASSF1Q9NS23 344 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 PNPLA3Q9NST1 481 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 ZNF226Q9NYT6 803 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 UBAP1Q9NZ09 502 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 ADAM18Q9Y3Q7 739 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 PCDHGB5Q9Y5G0 923 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 IER3IP1Q9Y5U9 82 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 IGHV3-15A0A0B4J1V0 119 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 TEX13CA0A0J9YWL9 993 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 A0A1W2PRG6 482 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 RIIAD1A6NNX1 92 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 ZNF814B7Z6K7 855 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 MS4A18H0YCH9 400 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 ARPC3O15145 178 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 IDH3BO43837 385 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 PRKYO43930 277 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 PLGP00747 810 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-205ENST00000564899 IFNGP01579 166 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 APEHP13798 732 aaKnown RBP9.9□□□□□ -0.82
SF3B3-205ENST00000564899 KLK2P20151 261 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 ENPP1P22413 925 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 P2RY4P51582 365 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 AGFG1P52594 562 aaKnown RBP9.9□□□□□ -0.82
SF3B3-205ENST00000564899 CLDN15P56746 228 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 C3AR1Q16581 482 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 ZNF239Q16600 458 aaKnown RBP9.9□□□□□ -0.82
SF3B3-205ENST00000564899 MS4A18Q3C1V0 323 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 KDM8Q8N371 416 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 TCEANCQ8N8B7 351 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 ANKK1Q8NFD2 765 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 OR8J1Q8NGP2 316 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 RHOXF1Q8NHV9 184 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 CNIH3Q8TBE1 160 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 TMEM163Q8TC26 289 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 FBLIM1Q8WUP2 373 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 TRUB1Q8WWH5 349 aaKnown RBP9.9□□□□□ -0.82
SF3B3-205ENST00000564899 CPNE4Q96A23 557 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-205ENST00000564899 SNRNP40Q96DI7 357 aaKnown RBP9.9□□□□□ -0.82
SF3B3-205ENST00000564899 TSPAN32Q96QS1 320 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 TIMP4Q99727 224 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 FANCFQ9NPI8 374 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 CMC2Q9NRP2 79 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 PLSCR2Q9NRY7 297 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 ASF1BQ9NVP2 202 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 TNFRSF10DQ9UBN6 386 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 GRHPRQ9UBQ7 328 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 AASSQ9UDR5 926 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 KLHL21Q9UJP4 597 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 CAMK2AQ9UQM7 478 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 RASD1Q9Y272 281 aa9.9□□□□□ -0.82
SF3B3-205ENST00000564899 NCKAP5O14513 1909 aa9.9□□□□□ -0.83
SF3B3-205ENST00000564899 IMPA2O14732 288 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 SMAD9O15198 467 aaKnown RBP9.89□□□□□ -0.83
SF3B3-205ENST00000564899 TLX2O43763 284 aaPredicted RBP9.89□□□□□ -0.83
SF3B3-205ENST00000564899 RAMP1O60894 148 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 SYNGR4O95473 234 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 SLC2A10O95528 541 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 TXNDC12O95881 172 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 IGHMP01871 453 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 HLA-DOBP13765 273 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 CPN1P15169 458 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF3P17036 446 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 GABRB1P18505 474 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 SDHAP31040 664 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 DAP3P51398 398 aaKnown RBP9.89□□□□□ -0.83
SF3B3-205ENST00000564899 SNRPGP62308 76 aaKnown RBP9.89□□□□□ -0.83
SF3B3-205ENST00000564899 H3F3AP84243 136 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 HSF1Q00613 529 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 POU3F1Q03052 451 aaPredicted RBP9.89□□□□□ -0.83
SF3B3-205ENST00000564899 CDK5R2Q13319 367 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 KRR1Q13601 381 aaKnown RBP9.89□□□□□ -0.83
SF3B3-205ENST00000564899 C1DQ13901 141 aaKnown RBP9.89□□□□□ -0.83
SF3B3-205ENST00000564899 ACKR1Q16570 336 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 GPR139Q6DWJ6 353 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 TMEM225Q6GV28 225 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 UGT2A3Q6UWM9 527 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 CHMP1BQ7LBR1 199 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms