RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 YLPM1P49750 1951 aaKnown RBP10.59□□□□□ -0.71
GTF3C1-204ENST00000564664 ZNF726A6NNF4 738 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 TRAF3IP2O43734 574 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 ENTPD5O75356 428 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 MFN2O95140 757 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 MT-ATP6P00846 226 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 OR4A8P0C604 315 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 NQO1P15559 274 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 NPR2P20594 1047 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 EVX1P49640 407 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 IDH3GP51553 393 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 IL1RL1Q01638 556 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 PMS2P3Q13401 168 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 ADIPOQQ15848 244 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 CEACAM16Q2WEN9 425 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 METTL21CQ5VZV1 264 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 ZNF613Q6PF04 617 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 LINC00114Q6XXX2 140 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 SLC46A3Q7Z3Q1 461 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 TMEM123Q8N131 208 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 NEU4Q8WWR8 484 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 NANOS1Q8WY41 292 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 SIKE1Q9BRV8 207 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 PIMREGQ9BSJ6 248 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 BEX2Q9BXY8 128 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 NELFAQ9H3P2 528 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 FBXL3Q9UKT7 428 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 NDUFAF1Q9Y375 327 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 SPEF1Q9Y4P9 236 aa10.58□□□□□ -0.72
GTF3C1-204ENST00000564664 FBN1P35555 2871 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 MXRA5Q9NR99 2828 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 HMGB1P1B2RPK0 211 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 BGLAPP02818 100 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 NR4A2P43354 598 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 PCBP3P57721 371 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 POU3F1Q03052 451 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 PUDPQ08623 228 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 GLIPR1L2Q4G1C9 344 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 UGT2A3Q6UWM9 527 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 NHLRC1Q6VVB1 395 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 PIP4P2Q8N4L2 257 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 RNF217Q8TC41 542 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 TMEM158Q8WZ71 300 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 HTRA1Q92743 480 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 MAGEB18Q96M61 343 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 DOK1Q99704 481 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 VRK1Q99986 396 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 CPPED1Q9BRF8 314 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 IKZF5Q9H5V7 419 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 MRGBPQ9NV56 204 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 INTS9Q9NV88 658 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 SEC14L4Q9UDX3 406 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 POFUT2Q9Y2G5 429 aa10.57□□□□□ -0.72
GTF3C1-204ENST00000564664 ANK3Q12955 4377 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 IGHV2OR16-5A0A0B4J2B6 119 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 SLC35F4A4IF30 521 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 M0QX08 132 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 M0R3G1 203 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 PLPP3O14495 311 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 LMX1BO60663 402 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 TPST2O60704 377 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 OR6A2O95222 327 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 IGHV4-31P0DP07 118 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 NR4A1P22736 598 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 CALCRP30988 508 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 THBS4P35443 961 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 CDH12P55289 794 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 TUBA1BP68363 451 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 TUBA4AP68366 448 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 HGFACQ04756 655 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 ZP4Q12836 540 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 INTS11Q5TA45 600 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 TUBA1AQ71U36 451 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 PATL1Q86TB9 770 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 COMTD1Q86VU5 262 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 C10orf111Q8N326 155 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 OR5J2Q8NH18 312 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 CKAP2Q8WWK9 683 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 RASSF5Q8WWW0 418 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 MPP4Q96JB8 637 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 FOXN4Q96NZ1 517 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 SORCS2Q96PQ0 1159 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 CGREF1Q99674 301 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 MCHR1Q99705 422 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 ARHGDIGQ99819 225 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 PRR14Q9BWN1 585 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 SLC19A3Q9BZV2 496 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 B3GNT2Q9NY97 397 aa10.56□□□□□ -0.72
GTF3C1-204ENST00000564664 hCG_2039718K7EN88 272 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 ANGPT2O15123 496 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 CHP2O43745 196 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 MGRN1O60291 552 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 HPRP00739 348 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 AHCYP23526 432 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 GIFP27352 417 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 AQP1P29972 269 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 CAPZA2P47755 286 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 DAG1Q14118 895 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 DUSP7Q16829 419 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 CYP51A1Q16850 503 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms