RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 LDLRAP1Q5SW96 308 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 PDPK2PQ6A1A2 396 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 SIGLEC15Q6ZMC9 328 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 TAF8Q7Z7C8 310 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 ZNF677Q86XU0 584 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 C12orf56Q8IXR9 622 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 CPNE9Q8IYJ1 553 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 LINC00518Q8N0U6 118 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 CADM2Q8N3J6 435 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 PACRGLQ8N7B6 248 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 LRTM2Q8N967 370 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 RNF149Q8NC42 400 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 TMEM185AQ8NFB2 350 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 OR5M9Q8NGP3 310 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 LHFPL5Q8TAF8 219 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 FANK1Q8TC84 345 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 LRRC39Q96DD0 335 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 KLF6Q99612 283 aaPredicted RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 SLC29A1Q99808 456 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 APOL2Q9BQE5 337 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 LXNQ9BS40 222 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 NUSAP1Q9BXS6 441 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 ANKRD60Q9BZ19 345 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 NAA50Q9GZZ1 169 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 NARFLQ9H6Q4 476 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 DHX33Q9H6R0 707 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 ZCCHC3Q9NUD5 404 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 ACOXLQ9NUZ1 547 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 SLC39A1Q9NY26 324 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 MAT2BQ9NZL9 334 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 ABCD2Q9UBJ2 740 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 XPO7Q9UIA9 1087 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 ENPP5Q9UJA9 477 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 ADAM28Q9UKQ2 775 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 AURKCQ9UQB9 309 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 ERVK-19Q9WJR5 959 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 MRPS2Q9Y399 296 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 UGT2A1Q9Y4X1 527 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 VPS13AQ96RL7 3174 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 KMT2EQ8IZD2 1858 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 ATG2AQ2TAZ0 1938 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 MIA3Q5JRA6 1907 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 CEP250Q9BV73 2442 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 F5P12259 2224 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 ACACBO00763 2458 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 IGKV6-21A0A0C4DH24 114 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 A0A1W2PRG6 482 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 ARL5CA6NH57 179 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 SAGE2PA6NJ88 616 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 FAM220BPB1ANY3 271 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 TOR1AO14656 332 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 TRDMT1O14717 391 aaKnown RBP3.12□□□□□ -1.91
CHD9-212ENST00000564641 AIM2O14862 343 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 NDUFA2O43678 99 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 TOM1L1O75674 476 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 TGFAP01135 160 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 HLA-DRAP01903 254 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 MT-ND1P03886 318 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 BPGMP07738 259 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 CD40LGP29965 261 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 ADSSP30520 456 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 SRD5A2P31213 254 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 HSD17B2P37059 387 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 TALDO1P37837 337 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 DDOSTP39656 456 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 RPS9P46781 194 aaKnown RBP3.12□□□□□ -1.91
CHD9-212ENST00000564641 HCAR3P49019 387 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 TNFSF10P50591 281 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 TKTL1P51854 596 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 SMSP52788 366 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 OR2B6P58173 313 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 DEFA1P59665 94 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 DEFA3P59666 94 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 POLR2GP62487 172 aaKnown RBP eCLIP3.12□□□□□ -1.91
CHD9-212ENST00000564641 IFITM3Q01628 133 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 LAMTOR4Q0VGL1 99 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 MERTKQ12866 999 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 BAMBIQ13145 260 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 EMC2Q15006 297 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 CLLU1OSQ5K130 101 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 TPGS2Q68CL5 300 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 OR4C11Q6IEV9 310 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 DCUN1D2Q6PH85 259 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 ZNF767PQ75MW2 155 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 PAGE2Q7Z2X7 111 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 LINC00523Q86TU6 105 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 WDR49Q8IV35 697 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 STHQ8IWL8 128 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 MICU2Q8IYU8 434 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 DHRSXQ8N5I4 330 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 ANKFN1Q8N957 763 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 CCNYQ8ND76 341 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 OR6Q1Q8NGQ2 317 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 OR13F1Q8NGS4 319 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 ENKURQ8TC29 256 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 ZFP90Q8TF47 636 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 PDCD6IPQ8WUM4 868 aaKnown RBP3.12□□□□□ -1.91
CHD9-212ENST00000564641 DCAKDQ8WVC6 231 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 TFB1MQ8WVM0 346 aaKnown RBP3.12□□□□□ -1.91
CHD9-212ENST00000564641 CRYGNQ8WXF5 182 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms