RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 TBC1D24Q9ULP9 559 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 PACSIN2Q9UNF0 486 aaPredicted RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 FAM168BA1KXE4 195 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 SPECC1L-ADORA2AF8WAN1 911 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 KRTAP4-16G5E9R7 235 aaPredicted RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 NDUFAB1O14561 156 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 GOSR2O14653 212 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 HSPB1P04792 205 aaKnown RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 KLK3P07288 261 aaPredicted RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 ERCC1P07992 297 aaPredicted RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 ZNF24P17028 368 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 PRKAR2BP31323 418 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 GLP1RP43220 463 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 OR1G1P47890 313 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 SSR4P51571 173 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 LIPEQ05469 1076 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 LHFPL3Q86UP9 236 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ZNF589Q86UQ0 364 aaPredicted RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 FBXL16Q8N461 479 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 BBS1Q8NFJ9 593 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 BPIFCQ8NFQ6 507 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 OR2AP1Q8NGE2 309 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ACOT11Q8WXI4 607 aaPredicted RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 ZNF75CPQ92670 426 aaPredicted RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 KIFAP3Q92845 792 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 CNPY3Q9BT09 278 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 IQCGQ9H095 443 aaKnown RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 RNF167Q9H6Y7 350 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 PDP1Q9P0J1 537 aaPredicted RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 ZNF107Q9UII5 783 aaPredicted RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 ASF1AQ9Y294 204 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 NEUROG3Q9Y4Z2 214 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 MROH5Q6ZUA9 1318 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 LAMC3Q9Y6N6 1575 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 A6NIZ1 184 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 SUPT3HB4E1H0 165 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 BOLA2-SMG1P6H3BVE0 249 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 RAB29O14966 203 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 MGRN1O60291 552 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ERLIN2O94905 339 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 TIMP1P01033 207 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 CGAP01215 116 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 RRM2P31350 389 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 FOXN2P32314 431 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 MAGEA1P43355 309 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 RPS5P46782 204 aaKnown RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 RGRP47804 291 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 NPBWR2P48146 333 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 CSNK1EP49674 416 aaKnown RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 DLX1P56177 255 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 RAP1BP61224 184 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ILKQ13418 452 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 GPNMBQ14956 572 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ATP6AP1Q15904 470 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 OR52I1Q8NGK6 324 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 MARCH1Q8TCQ1 289 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 DTX3LQ8TDB6 740 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ISG20Q96AZ6 181 aaKnown RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 HSFY1Q96LI6 401 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 EBF4Q9BQW3 602 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 TMEM246Q9BRR3 403 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ADAP2Q9NPF8 381 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ZNF275Q9NSD4 429 aaPredicted RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 CLCF1Q9UBD9 225 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 TRBV9A0A0B4J1U6 114 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 ERVV-1B6SEH8 477 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 C12orf77C9JDV5 145 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 LSM1O15116 133 aaKnown RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 GSSP48637 474 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 TMED10P49755 219 aaKnown RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 DIO3P55073 304 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 EIF3EP60228 445 aaKnown RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 DOC2AQ14183 400 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 ITIH4Q14624 930 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 HADHQ16836 314 aaKnown RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 C9orf135Q5VTT2 229 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 C22orf42Q6IC83 251 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 Q6ZR54 194 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 RFLNAQ6ZTI6 216 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 EIF3MQ7L2H7 374 aaKnown RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 IQCKQ8N0W5 287 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 ZNF557Q8N988 423 aaPredicted RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 ACOT4Q8N9L9 421 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 OR10H4Q8NGA5 316 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 ZNF564Q8TBZ8 553 aaPredicted RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 ACTR6Q9GZN1 396 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 RANBP3Q9H6Z4 567 aaPredicted RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 LYRM4Q9HD34 91 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 SH2D2AQ9NP31 389 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 FGF20Q9NP95 211 aaPredicted RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 CALYQ9NYX4 217 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 TREM2Q9NZC2 230 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 MMP17Q9ULZ9 603 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 KCNE1BA0A087WTH5 132 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 KBTBD11-OT1A0A1B0GTJ5 212 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 EPOPA6NHQ4 379 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 SIRPB1O00241 398 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 EIF3HO15372 352 aaKnown RBP eCLIP1.87□□□□□ -2.111e-7■■■■□ 24.2
CHD9-209ENST00000564255 AKR7A2O43488 359 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms