RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 GPR139Q6DWJ6 353 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 PLBD1Q6P4A8 553 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 PXKQ7Z7A4 578 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 SIAH3Q8IW03 269 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 WDFY1Q8IWB7 410 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 KDF1Q8NAX2 398 aaPredicted RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 NPEPL1Q8NDH3 523 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 ZNF519Q8TB69 540 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 GGHQ92820 318 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 ZNF845Q96IR2 970 aaPredicted RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 NMNAT3Q96T66 252 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 NAA11Q9BSU3 229 aaPredicted RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 EXO5Q9H790 373 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 FKBP14Q9NWM8 211 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 LUZP4Q9P127 313 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 TNFRSF10DQ9UBN6 386 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 A0A1W2PRG6 482 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 OR6C68A6NDL8 312 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 PTGES3LE9PB15 166 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 PRR23D1E9PI22 279 aaPredicted RBP9.08□□□□□ -0.96
SMG1-208ENST00000563448 SMAD9O15198 467 aaKnown RBP9.08□□□□□ -0.96
SMG1-208ENST00000563448 IFNGP01579 166 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 PRR23D2P0DMB1 279 aaPredicted RBP9.08□□□□□ -0.96
SMG1-208ENST00000563448 CLUP10909 449 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 ENPP1P22413 925 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 ACVR2AP27037 513 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 ACVR1BP36896 505 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 EIF1AXP47813 144 aaKnown RBP9.08□□□□□ -0.96
SMG1-208ENST00000563448 GABARAPL2P60520 117 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 CSNK2BP67870 215 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 SLC35A2P78381 396 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 HSF1Q00613 529 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 KRR1Q13601 381 aaKnown RBP9.08□□□□□ -0.96
SMG1-208ENST00000563448 BCL2A1Q16548 175 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 PDSS1Q5T2R2 415 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 ARMC4Q5T2S8 1044 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 NXNL2Q5VZ03 156 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 TMEM225Q6GV28 225 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 LEG1Q6P5S2 330 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 SLC35D2Q76EJ3 337 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 GHDCQ8N2G8 530 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 ARIH2OSQ8N7S6 290 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 ZNF540Q8NDQ6 660 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 C9orf43Q8TAL5 461 aaPredicted RBP9.08□□□□□ -0.96
SMG1-208ENST00000563448 ASB10Q8WXI3 467 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 OTULINQ96BN8 352 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 TXNDC15Q96J42 360 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 OXGR1Q96P68 337 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 TIMP4Q99727 224 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 DUSP21Q9H596 190 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 PRORYQ9H606 182 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 MED29Q9NX70 200 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 SCN3BQ9NY72 215 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 KLHL13Q9P2N7 655 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 PSORS1C1Q9UIG5 152 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 TPRKBQ9Y3C4 175 aa9.08□□□□□ -0.96
SMG1-208ENST00000563448 DOCK7Q96N67 2140 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 LOC102725191A0A1B0GVB3 256 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 A0A1B0GVC2 190 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 NPIPB13A6NJU9 1138 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 NPIPB4C9JG80 1138 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 H7C1C5 153 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 PRODHO43272 600 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 HTR1AP08908 422 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 IFNGR1P15260 489 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 SLC2A5P22732 501 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 SLC15A1P46059 708 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 LCN6P62502 163 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 APOFQ13790 326 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 INAQ16352 499 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 C3AR1Q16581 482 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 GPAT4Q86UL3 456 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 JAZF1Q86VZ6 243 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 UEVLDQ8IX04 471 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 MEIOBQ8N635 442 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 TSPAN14Q8NG11 270 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 ROBO4Q8WZ75 1007 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 WDYHV1Q96HA8 205 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 ARHGAP9Q9BRR9 750 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 NMNAT2Q9BZQ4 307 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 PLSCR2Q9NRY7 297 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 ERVK-18Q9QC07 812 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 BLOC1S6Q9UL45 172 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 RASD1Q9Y272 281 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 NOX1Q9Y5S8 564 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 SVILO95425 2214 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 CCDC182A6NF36 153 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 CLCA1A8K7I4 914 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 NPIPA5E9PKD4 350 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 ARHGEF9O43307 516 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 TRAF3IP2O43734 574 aaPredicted RBP9.07□□□□□ -0.96
SMG1-208ENST00000563448 BCL10O95999 233 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 GYPBP06028 91 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 DBTP11182 482 aaKnown RBP9.07□□□□□ -0.96
SMG1-208ENST00000563448 CPN1P15169 458 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 EEF1B2P24534 225 aaKnown RBP9.07□□□□□ -0.96
SMG1-208ENST00000563448 CDH11P55287 796 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 ZNF91Q05481 1191 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 RUNX1T1Q06455 604 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 POU4F3Q15319 338 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms