RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 SYNGR4O95473 234 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 HMGN1P05114 100 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 F13BP05160 661 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 AHCYP23526 432 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 PTGS2P35354 604 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 RPL4P36578 427 aaKnown RBP13.16□□□□□ -0.3
CDH11-207ENST00000563255 CDC42P60953 191 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 MYBPC1Q00872 1141 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 PDK3Q15120 406 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 SF3B4Q15427 424 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDH11-207ENST00000563255 PGGHGQ32M88 737 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 EMC4Q5J8M3 183 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 CLEC12AQ5QGZ9 265 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 ZNF691Q5VV52 312 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 ZNF787Q6DD87 383 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 ABLIM2Q6H8Q1 611 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 NHLRC1Q6VVB1 395 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 FAM122BQ7Z309 247 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 FGD2Q7Z6J4 655 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 CCDC103Q8IW40 242 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 SETD9Q8NE22 299 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 TRUB1Q8WWH5 349 aaKnown RBP13.16□□□□□ -0.3
CDH11-207ENST00000563255 UCN2Q96RP3 112 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 TUBA1CQ9BQE3 449 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 ANKRD60Q9BZ19 345 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 PRRG3Q9BZD7 231 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 TXNIPQ9H3M7 391 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 B3GAT1Q9P2W7 334 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 ZNF175Q9Y473 711 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 HSPE1-MOB4S4R3N1 261 aa13.16□□□□□ -0.3
CDH11-207ENST00000563255 ITPR2Q14571 2701 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 IGHV3-15A0A0B4J1V0 119 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 A0A1W2PRG6 482 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 RAMP1O60894 148 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 PPP1R3DO95685 299 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 TXNDC12O95881 172 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 EDN3P14138 238 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 ACADSP16219 412 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 MYF6P23409 242 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 EFNB1P98172 346 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 SLC17A1Q14916 467 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 C3AR1Q16581 482 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 GPR139Q6DWJ6 353 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 CASP12Q6UXS9 341 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 FCRLAQ7L513 359 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 IGFN1Q86VF2 1251 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 UEVLDQ8IX04 471 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 DEPDC4Q8N2C3 294 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 KDM8Q8N371 416 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 IQCF1Q8N6M8 205 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 RNF128Q8TEB7 428 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 ROBO4Q8WZ75 1007 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 MUS81Q96NY9 551 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 ERMAPQ96PL5 475 aaPredicted RBP13.15□□□□□ -0.3
CDH11-207ENST00000563255 SLC38A2Q96QD8 506 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 APOL4Q9BPW4 351 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 KATNB1Q9BVA0 655 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 POLDIP3Q9BY77 421 aaKnown RBP13.15□□□□□ -0.3
CDH11-207ENST00000563255 IER3IP1Q9Y5U9 82 aa13.15□□□□□ -0.3
CDH11-207ENST00000563255 CRYBG3Q68DQ2 2970 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 ZNF716A6NP11 495 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 CLCA1A8K7I4 914 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 SURF4O15260 269 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 WDR1O75083 606 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 HLA-DOBP13765 273 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 GABRA1P14867 456 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 ZNF43P17038 809 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 KLK2P20151 261 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 NOS3P29474 1203 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 SDHAP31040 664 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 PTGER4P35408 488 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 SLC16A1P53985 500 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 RPL27P61353 136 aaKnown RBP13.14□□□□□ -0.31
CDH11-207ENST00000563255 ISL1P61371 349 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 ERVK-25P63136 954 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 PON3Q15166 354 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 GTF2IRD2BQ6EKJ0 949 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 CREB3L2Q70SY1 520 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 SLC35D2Q76EJ3 337 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 GPAT4Q86UL3 456 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 GTF2IRD2Q86UP8 949 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 CCDC71Q8IV32 467 aaPredicted RBP13.14□□□□□ -0.31
CDH11-207ENST00000563255 C8orf59Q8N0T1 100 aaPredicted RBP13.14□□□□□ -0.31
CDH11-207ENST00000563255 FAM57AQ8TBR7 257 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 TSPAN32Q96QS1 320 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 RNF122Q9H9V4 155 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 CMC2Q9NRP2 79 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 PNPLA3Q9NST1 481 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 TVP23BQ9NYZ1 205 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 CLCF1Q9UBD9 225 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 GRHPRQ9UBQ7 328 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 KLHL21Q9UJP4 597 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 ZNF346Q9UL40 294 aaKnown RBP13.14□□□□□ -0.31
CDH11-207ENST00000563255 ZNF835Q9Y2P0 537 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 ADAM18Q9Y3Q7 739 aa13.14□□□□□ -0.31
CDH11-207ENST00000563255 IGKV3D-15A0A087WSY6 115 aa13.13□□□□□ -0.31
CDH11-207ENST00000563255 MPZL2O60487 215 aa13.13□□□□□ -0.31
CDH11-207ENST00000563255 CLIC3O95833 236 aa13.13□□□□□ -0.31
CDH11-207ENST00000563255 BCL10O95999 233 aa13.13□□□□□ -0.31
CDH11-207ENST00000563255 HOXD4P09016 255 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms