RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ARL5AQ9Y689 179 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 A0A1W2PP64 1363 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 A0A087WWV3 80 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 C9orf170A2RU37 121 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 LRRC30A6NM36 301 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 ZAR1LA6NP61 321 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SNX3O60493 162 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 RNASEH1O60930 286 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 NDUFA7O95182 113 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 GASTP01350 101 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 JUNP05412 331 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 DCNP07585 359 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 SFTPBP07988 381 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SRD5A2P31213 254 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 HPCAL1P37235 193 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 PDLIM4P50479 330 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 DAP3P51398 398 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 CRISP1P54107 249 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 GEMP55040 296 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TMEM50BP56557 158 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 PUDPQ08623 228 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 GAB1Q13480 694 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 PSG5Q15238 335 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TBR1Q16650 682 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 AKIRIN2Q53H80 203 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TNFAIP8L3Q5GJ75 292 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TMEM200BQ69YZ2 307 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 LPCAT3Q6P1A2 487 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 FAHD1Q6P587 224 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 CD164L2Q6UWJ8 174 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TRMT1LQ7Z2T5 733 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 ANKRD33Q7Z3H0 272 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TMED4Q7Z7H5 227 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 IFT20Q8IY31 132 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 ABHD4Q8TB40 342 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 PINX1Q96BK5 328 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 L3HYPDHQ96EM0 354 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 NKX3-1Q99801 234 aaPredicted RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 ECSITQ9BQ95 431 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TMEM27Q9HBJ8 222 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 WFDC1Q9HC57 220 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 RETNQ9HD89 108 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 FLT4P35916 1363 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TNRC18O15417 2968 aaPredicted RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 MYH8P13535 1937 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 KIF1BO60333 1816 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 KCPQ6ZWJ8 1503 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 MED23Q9ULK4 1368 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 PPIAL4CA0A0B4J2A2 164 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 KIR2DL5BA0A0G2JN68 375 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 KIR2DL5BA0A0G2JPC4 375 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 PP2D1A8MPX8 630 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 C21orf140B9A014 251 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SLC16A4O15374 487 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 FGF16O43320 207 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 PRKYO43930 277 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 FADS1O60427 444 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SEMA7AO75326 666 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 HPP00738 406 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 JCHAINP01591 159 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 VTNP04004 478 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 GYPCP04921 128 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 C2P06681 752 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 PPIAL4GP0DN37 164 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 BMP3P12645 472 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 JUNBP17275 347 aaPredicted RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 GM2AP17900 193 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SERPINA2P20848 420 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 CSKP41240 450 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 CRYBB2P43320 205 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TAS2R41P59536 307 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 FPGSQ05932 587 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SLC18A2Q05940 514 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 ZNF844Q08AG5 666 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 NME3Q13232 169 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 UBE2V1Q13404 147 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 ASAH1Q13510 395 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 CEACAM7Q14002 265 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TRAM1Q15629 374 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 DEFB115Q30KQ5 88 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TMEM52BQ4KMG9 183 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 RESP18Q5W5W9 173 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 LPCAT4Q643R3 524 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 LINC00336Q6ZUF6 198 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TMPRSS11FQ6ZWK6 438 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 HDDC2Q7Z4H3 204 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 BLIDQ8IZY5 108 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 KIR2DL5AQ8N109 375 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 PRSS35Q8N3Z0 413 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 ADAD2Q8NCV1 583 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 LFNGQ8NES3 379 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 KIR2DL5BQ8NHK3 375 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 ABHD3Q8WU67 409 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SDHCQ99643 169 aaPredicted RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 GFI1Q99684 422 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 UGT2B28Q9BY64 529 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SPRTNQ9H040 489 aaPredicted RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 EGLN3Q9H6Z9 239 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 WDR41Q9HAD4 459 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 ECHDC1Q9NTX5 307 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms